DY270415

Overview
NameDY270415
Unique NameDY270415
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1225
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 1.581e-100
Identity = 189/212 (89.15%), Postives = 193/212 (91.04%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLTGGVIANREGI WATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVE+LLASLDKNE+      L          PF +G+PQ
Sbjct:   73 NGSTLTGGVIANREGICWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVESLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 5.264e-96
Identity = 177/212 (83.49%), Postives = 190/212 (89.62%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLTGGVIANREGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ QIIKDIREFKEKNKVD+VVVLWTANTERYSNV+VGLNDT+ENL AS+D+NE+      L          PF +G+PQ
Sbjct:   73 NGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQIDQIIKDIREFKEKNKVDKVVVLWTANTERYSNVVVGLNDTMENLFASVDRNEAEISPSTLYAIACILENVPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 8.980e-96
Identity = 177/215 (82.33%), Postives = 193/215 (89.77%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNE---S*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLTGGVIANREGISWATKD +QQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAM RARVFDIDLQKQLRPYME MVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ ++IKDIREFKEKNKVD+VVVLWT NTERYSNV+VGLNDT+ENLLASL+KNE   S + S+ L C        PF +G+PQ
Sbjct:   75 NGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMTRARVFDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVERVIKDIREFKEKNKVDKVVVLWTGNTERYSNVVVGLNDTMENLLASLEKNESEISPSTSYALAC---IEENIPFINGSPQ 286          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 3.412e-95
Identity = 176/212 (83.02%), Postives = 189/212 (89.15%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLTGGVIANREGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ QIIKDIREFKEKNKVD+VVVLWTANTERYSNV+VGLNDT+ENL AS+D+NE+      L          PF +G+PQ
Sbjct:   73 NGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISGMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQIDQIIKDIREFKEKNKVDKVVVLWTANTERYSNVVVGLNDTMENLFASVDRNEAEISPSTLYAIACILENVPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 8.405e-94
Identity = 175/212 (82.55%), Postives = 187/212 (88.21%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYMESMVPLPGIYD DFIAANQGSRANNVIKGTKKEQM QIIKDIREFKEK+KVD+VVVLWTANTERYSNV VGLNDT+ENLLAS+DKNE+      L          PF +G+PQ
Sbjct:   73 NGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVCVGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 3.194e-93
Identity = 173/212 (81.60%), Postives = 189/212 (89.15%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME MVPLPGIYD DFIAANQGSRAN+VIKGTKKEQ+ QIIKD+REFKEKNKVD++VVLWTANTERYS+V+VGLNDT+ENLLAS++KNES      L          PF +G+PQ
Sbjct:   73 NGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANSVIKGTKKEQVDQIIKDMREFKEKNKVDKLVVLWTANTERYSDVVVGLNDTMENLLASVEKNESEISPSTLYAIACVLEGIPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 5.448e-93
Identity = 174/212 (82.08%), Postives = 183/212 (86.32%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTL  GVIANREGISWATKD VQQANYFGSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAM RA+V DIDLQKQLRPYMESM PLPGIYD DFIAANQGSRANNVIKGTKKEQM Q+IKDIREFKEKNKVD+VVVLWTANTERYSNV VGLNDT ENLLAS+DKNE+      L          PF +G+PQ
Sbjct:   73 NGSTLMAGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISSMNLADAMTRAKVLDIDLQKQLRPYMESMCPLPGIYDPDFIAANQGSRANNVIKGTKKEQMEQVIKDIREFKEKNKVDKVVVLWTANTERYSNVSVGLNDTTENLLASVDKNEAEISPSTLYAIACVMEGVPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 340.502 bits (872), Expect = 1.214e-92
Identity = 172/212 (81.13%), Postives = 186/212 (87.74%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDDIVFGGWDIS+MNLAD+M RA+V DIDLQKQLRPYMESMVPLPGIYD DFIAANQGSRAN+VIKGTKKEQ+ QIIKDIREFKEKNKVD++VVLWTANTERYSNV  GLNDT+ENLLAS+DKNE+      L          PF +G+PQ
Sbjct:   73 NGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADSMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANSVIKGTKKEQVEQIIKDIREFKEKNKVDKIVVLWTANTERYSNVCAGLNDTMENLLASVDKNEAEVSPSTLYAIACVMEGVPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 2.704e-92
Identity = 171/212 (80.66%), Postives = 188/212 (88.68%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNP+D+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME+M+PLPGIYD DFIAANQGSRAN+VIKGTKKEQ+  IIKD+REFKEKNKVD++VVLWTANTERYSNVIVGLNDT ENLLAS++K+ES      L          PF +G+PQ
Sbjct:   73 NGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPEDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENMIPLPGIYDPDFIAANQGSRANSVIKGTKKEQVDHIIKDMREFKEKNKVDKLVVLWTANTERYSNVIVGLNDTTENLLASVEKDESEISPSTLYAIACVLEGIPFINGSPQ 284          
BLAST of DY270415 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 6.023e-92
Identity = 168/212 (79.25%), Postives = 188/212 (88.68%), Query Frame = 2
Query:    2 NGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDLDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNES*NFSFHLVCYWLCS*KYPFHHGNPQ 637
            NGSTLTGGVIANREGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYME MVPLPGIYD DFIAANQGSRANNVIKGTKKEQ+ QIIKD+R+FKE+NKVD+VVVLWTANTERYSNV+VGLNDT E+L+AS+++NE+      L          PF +G+PQ
Sbjct:   73 NGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISNMNLADAMGRAKVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVQQIIKDMRDFKEQNKVDKVVVLWTANTERYSNVVVGLNDTAESLMASVERNEAEISPSTLYAIACVFENVPFINGSPQ 284          
The following BLAST results are available for this feature:
BLAST of DY270415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA1.581e-10089.15Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_NICPA5.264e-9683.49Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_MESCR8.980e-9682.33Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_TOBAC3.412e-9583.02Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_ORYSJ8.405e-9482.55Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_WHEAT3.194e-9381.60Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO1_HORVU5.448e-9382.08Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_MAIZE1.214e-9281.13Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO2_ARATH2.704e-9280.66Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_SESIN6.023e-9279.25Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YI17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270415 ID=DY270415; Name=DY270415; organism=Citrus clementina; type=EST; length=1225bp
CAACGGCTCAACCCTTACGGGTGGTGTTATCGCGAATCGAGAGGGAATCT
CCTGGGCCACAAAGGACACAGTGCAACAAGCCAATTATTTTGGTTCACTT
ACCCAAGCATCAGCAATTAGAGTTGGGTCTTACAATGGAGAGGAGATTTA
TGCTCCATTCAAGAGCATTCTCCCTATGGTGAACCCAGATGACATTGTGT
TTGGAGGATGGGACATTAGTGACATGAACTTGGCTGATGCCATGGCCAGG
GCTAGAGTGTTTGATATTGATCTTCAAAAGCAACTTAGGCCTTACATGGA
ATCAATGGTCCCACTTCCTGGAATCTATGACCTTGATTTCATTGCTGCCA
ATCAAGGGTCCCGTGCCAACAACGTGATCAAAGGAACCAAGAAAGAACAA
ATGCTACAAATCATCAAAGATATTAGAGAGTTTAAGGAGAAAAACAAGGT
GGATAGGGTTGTTGTACTGTGGACTGCTAACACTGAGAGGTACAGTAATG
TGATTGTTGGGCTAAATGACACAGTGGAGAACCTTCTTGCTTCACTGGAC
AAAAACGAAAGCTGAAATTTCTCCTTCCACCTTGTATGCTATTGGTTGTG
TTCTTGAAAATATCCCTTTCATCATGGAAACCCCCAAAAACCCCTATGTT
ACCAACGGCTTATTTGACTTGGCCTAATAAAGAAGAACCACTTTGATTGG
TGAAACATCCTTTCAAAGAATTAGCGCAGAACTAACATGAAACCCCTTTT
GGACTAAATTCCCTCTTCTCGTGCAGATGAATCAAACAAAAAATACAAAT
GTCACCTTCCACCACCCTTGCAAACAACAAGATTAAATACTTACCATTCC
ACTCACCTCATCCCACACCTACTTCAATGAACTTTCTAAAACCCCAACGT
CGCTACTGACATTGCTCTCCCAACCTTCGCAATCCTTTTCACGCTCCCTG
CGACACCCTTCCATGCTCCTCTTCCAAACTAAATTTATATAGCCTACATT
TCCATATTTATCAATATTATCTAATAAATACAATCAACTACCTAACTAAT
ATCATTTTATATTACTAAATAACAACCATACTACACTTTCAATAATTAAG
TCGACTACACATCCACCCTACTACCTACCCCACTACCCGCACAATCACTT
TCTCTCTCCCCGCCTCAACTATTCCAAACTCCAACTCTCTAGCAATACCA
CTACAAATCACTAACCCCACAACAA
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