DY270425

Overview
NameDY270425
Unique NameDY270425
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1234
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14993 contig Ccv1_Contig14993:18..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: S14L1_HUMAN (SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.861e-15
Identity = 64/235 (27.23%), Postives = 112/235 (47.66%), Query Frame = 1
Query:   82 LKITFQNIHRGY--PTETLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILSKPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVG-------LSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLSALSQ--IKLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGS---GQNDLLKTMVFEPLPPFCS 744
            L+   Q  H+G     E ++RFL+ARD N+ KA +++   L WR Q+++D IL     P    + ++D    G   + ++  P++ + +G       +    + ++  YV   + +NE R R    +     GRPI++   ++D+ GL +  L +  +K L  I  V + NYP+      I+  P +F   W +V+P     TR+K  +  G+   G   LL  +  E +P F S
Sbjct:  262 LRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPP----QVLQDYYAGGWHHHDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYV---LSVNEERLRRCEENTKV-FGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLS 488          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: SEC14_ASHGO (SEC14 cytosolic factor OS=Ashbya gossypii GN=SEC14 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.987e-14
Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  127 TLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILS------KPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLSALSQI-KLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGSGQNDLLKTMVFEPLP 732
            TL+RFL+AR  +V+ A  M  +C  WR +N +D I        KP+V     +    +   G   Y  E   V    +   T  +  +   +  +   + YR    LP++S +    + T   +LD+ G+ +SA +Q+   +   S +    YP++   +Y++N P+ FSA +++  P     T  KI +L  S Q +LLK +  E LP
Sbjct:   58 TLLRFLRARKFDVAAARAMFENCEKWRKENGVDTIFEDFHYEEKPLVAKFYPQYYHKTDKDGRPVYIEELGAVNLTEMYKITTQERMLKNLIWEYESFSRYR----LPASSRQADCLVETSCTILDLKGISISAAAQVLSYVREASNIGQNYYPERMGKFYMINAPFGFSAAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 262          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae GN=SEC14 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 5.634e-13
Identity = 58/209 (27.75%), Postives = 95/209 (45.45%), Query Frame = 1
Query:  127 TLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILS------KPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLS-ALSQIKLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGSGQNDLLKTMVFEPLP 732
            TL+RFL+AR  +V  A +M  +C  WR     D IL       KP++     +    +   G   Y  E   V    +   T ++  +   V  +  + +YR    LP+ S   G  + T   ++D+ G+ +S A S +  +   S +    YP++   +YI+N P+ FS  +++  P     T  KI +L  S Q +LLK +  E LP
Sbjct:   57 TLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYR----LPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 261          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: SEC14_CANAL (SEC14 cytosolic factor OS=Candida albicans GN=SEC14 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.609e-13
Identity = 62/213 (29.11%), Postives = 103/213 (48.36%), Query Frame = 1
Query:  127 TLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILS------KPIV----PTELYRAVRDSQLIGMSGYSRESLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKL-SALSQIKLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGSGQNDLLKTMVFEPLP 732
            +L+RFL+AR  ++ KA  M + C  WR    ++ IL       KPIV    PT  ++  +D + +    Y  E   V  V +   T  +  +   V  +  + +YR    LP+ S K G  + T   VLD++G+ + SA + I  +   S +    YP++   +Y++N P+ FS  +K+  P     T  KI +L  S + +LLK +  + LP
Sbjct:   57 SLLRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYEEKPIVAKMYPTYYHKTDKDGRPV----YFEELGKVDLVKMLKITTQERMLKNLVWEYEAMCQYR----LPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKKELLKQIPPQNLP 261          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: S14L5_XENTR (SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.609e-13
Identity = 56/209 (26.79%), Postives = 96/209 (45.93%), Query Frame = 1
Query:   82 LKITFQNIHRGY--PTETLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILSKPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVG---LSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLSALSQ--IKLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGS 687
            L+   Q  H+G     E ++RFL+ARD N+ KA +ML   L WR Q+++D IL     P    R + +    G   + ++  P++ + +G        KA     +  H+       +      + + GRPI +   ++D+ GL +  L +  +K L  I  V + NYP+      IV  P +F   W +V+P     +R+K  +  G+
Sbjct:  258 LRQWLQETHKGKIPKDEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDYILQTWQPP----RVLEEYYAGGWHYHDKDGRPLYILRLGQVDTKGLVKALGEEAILRHVLSINEEGQKRCEENTRQFGRPIWSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLIVRAPRVFPVLWTLVSPFINENSRQKFLIYSGN 462          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: SEC14_KLULA (SEC14 cytosolic factor OS=Kluyveromyces lactis GN=SEC14 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.639e-12
Identity = 57/209 (27.27%), Postives = 94/209 (44.98%), Query Frame = 1
Query:  127 TLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILS------KPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLSALSQI-KLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGSGQNDLLKTMVFEPLP 732
            TL+RFL+AR  ++  +  M  +C  WR +  +D I        KP+V     +    +   G   Y  E   V    +   T  +  +   V  +     YR    LP+ S K G  + T   +LD+ G+ +S+ +Q+   +   S +    YP++   +Y++N P+ FS  +++  P     T  KI +L  S Q DLLK +  E LP
Sbjct:   55 TLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIFEDFHYEEKPLVAKYYPQYYHKTDNDGRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYR----LPACSRKAGYLVETSCTILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKDLLKQIPAENLP 259          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata GN=SEC14 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.796e-12
Identity = 57/209 (27.27%), Postives = 96/209 (45.93%), Query Frame = 1
Query:  127 TLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILS------KPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLS-ALSQIKLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGSGQNDLLKTMVFEPLP 732
            TL+RFL+AR  +V+ A +M  +C  WR +   + I+       KP+V     +    +   G   Y  E   V    +   T  +  +   V  +  +  YR    LP+ S   G  + T   V+D+ G+ +S A S +  +   S +    YP++   +Y++N P+ FS  +++  P     T  KI +L  S Q++LLK +  E LP
Sbjct:   55 TLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTIMQDFHYDEKPLVAKYYPQYYHKTDKDGRPVYFEELGAVNLTEMEKITTQERMLKNLVWEYESVVNYR----LPACSRAAGYLVETSCTVMDLKGISISSAYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQSELLKQIPAENLP 259          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: S14L5_HUMAN (SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 3.652e-12
Identity = 62/234 (26.50%), Postives = 107/234 (45.73%), Query Frame = 1
Query:   82 LKITFQNIHRGY--PTETLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKIL---SKPIVPTELYRAVRDSQLIGMSGYSRESLPVFAVGVG----LSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLSALSQ--IK-LLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGS---GQNDLLKTMVFEPLPPF 738
            L+   Q  H+G     E ++RFL+A D ++ KA +ML   L WR Q+++D +L     P +  E Y         G      +  P++ + +G                ++  + +NE   +     ++ + GRPI++   +LD+ GL +  L +  +K LL +I  V+D NYP+      IV  P +F   W +++P     TR+K  +  GS   G   L+  +  E +P F
Sbjct:  249 LRHWLQETHKGKIPKDEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLEEFYAG-------GWHYQDIDGRPLYILRLGQMDTKGLMKAVGEEALLRHVLSVNE-EGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVED-NYPETLGRLLIVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDF 473          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.062e-11
Identity = 59/229 (25.76%), Postives = 106/229 (46.29%), Query Frame = 1
Query:   13 EMVTVSHEAVTQFQALMDQVDEPLKITFQNIHRGYPTETLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKIL---SKPIV-----PTELYRAVRDSQLIGMSGYSRESLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVILPSASAKHGRPITTCVKVLDMTGLKLSALSQ--IK-LLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKK 666
            ++  +    + + + ++D VD+        + R    +T++RFL ARD +VS+A+ ML D L WR ++ ID +L   SKP V     P   +   +D + + +       +      +G+    + ++H   +   +INE  +R+          +P+     ++D+ GL +  L +  IK LL II TV + NYP+      +V  P +F   W +V+      TR K
Sbjct:  216 QLSPMQESKLLELRKMLDGVDD--------LERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERL---------EKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETV-ERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSK 426          
BLAST of DY270425 vs. ExPASy Swiss-Prot
Match: S14L4_MOUSE (SEC14-like protein 4 OS=Mus musculus GN=Sec14l4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.273e-11
Identity = 60/213 (28.17%), Postives = 102/213 (47.89%), Query Frame = 1
Query:  130 LVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILSKPIVPTELYRAVRDSQLI---GMSGYSRESLPVFAVGVGL----STFDKASVHCYVQSHIQINEYRDRVILPSA---SAKHGRPITTCVKVLDMTGLKLSALSQ--IKLLTIISTVDDLNYPKKTNTYYIVNVPYIFSACWKVVNPLPQGRTRKKIQVLPGSGQNDLLKTMVFEPLP 732
            L+R+L+AR+ ++ K+  ML   + +R Q  +D+IL+        ++A    QL    G+SGY  E  PV+   +G       F  AS    ++  I++ E    ++L      S K GR I   V V DM GL L  L +  +++      + + NYP+      I+  P +F   + +V       T+KKI +L G+ + +L+K +  + LP
Sbjct:   38 LLRWLRARNFDLKKSEDMLRKHVEFRNQQNLDQILT--------WQAPEVIQLYDSGGLSGYDYEGCPVWFDIIGTMDPKGLFMSASKQDMIRKRIKVCE----MLLHECELQSQKLGRKIERMVMVFDMEGLSLRHLWKPAVEVYQQFFAILEANYPETVKNLIIIRAPKLFPVAFNLVKSFMGEETQKKIVILGGNWKQELVKFVSPDQLP 238          
The following BLAST results are available for this feature:
BLAST of DY270425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
S14L1_HUMAN7.861e-1527.23SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE... [more]
SEC14_ASHGO2.987e-1427.75SEC14 cytosolic factor OS=Ashbya gossypii GN=SEC14... [more]
SEC14_YEAST5.634e-1327.75SEC14 cytosolic factor OS=Saccharomyces cerevisiae... [more]
SEC14_CANAL9.609e-1329.11SEC14 cytosolic factor OS=Candida albicans GN=SEC1... [more]
S14L5_XENTR9.609e-1326.79SEC14-like protein 5 OS=Xenopus tropicalis GN=sec1... [more]
SEC14_KLULA1.639e-1227.27SEC14 cytosolic factor OS=Kluyveromyces lactis GN=... [more]
SEC14_CANGA2.796e-1227.27SEC14 cytosolic factor OS=Candida glabrata GN=SEC1... [more]
S14L5_HUMAN3.652e-1226.50SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE... [more]
RETM_DROME1.062e-1125.76Protein real-time OS=Drosophila melanogaster GN=re... [more]
S14L4_MOUSE5.273e-1128.17SEC14-like protein 4 OS=Mus musculus GN=Sec14l4 PE... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270425 ID=DY270425; Name=DY270425; organism=Citrus clementina; type=EST; length=1234bp
CTGAGATCACAGGAAATGGTTACCGTTTCTCATGAAGCTGTCACTCAGTT
CCAAGCTCTGATGGATCAAGTTGATGAGCCATTGAAGATTACATTTCAGA
ATATTCATCGAGGATATCCAACTGAAACTTTGGTTCGTTTTCTAAAAGCC
AGAGATGGGAATGTTTCCAAAGCTCATAAAATGTTGATGGATTGTTTGCA
CTGGAGGGCACAGAATGAGATTGACAAAATATTATCAAAACCCATAGTAC
CTACTGAATTGTACAGAGCCGTGCGTGATTCACAGCTCATAGGAATGTCA
GGTTACTCAAGAGAGAGTTTGCCAGTCTTTGCTGTTGGTGTAGGGCTCAG
TACGTTTGACAAAGCATCTGTCCACTGCTATGTGCAATCACATATTCAAA
TAAATGAATATAGGGATCGTGTCATTTTGCCTTCGGCATCAGCAAAGCAT
GGGCGACCAATAACCACATGTGTGAAGGTTTTAGATATGACTGGTCTGAA
GCTTTCAGCATTAAGCCAGATAAAGTTATTGACAATCATATCGACAGTTG
ATGACTTGAACTACCCAAAGAAGACAAATACATATTATATTGTGAATGTG
CCATACATATTTTCCGCATGTTGGAAGGTCGTTAACCCCCTTCCGCAGGG
GAGGACAAGGAAAAAGATTCAGGTCTTGCCAGGTTCCGGGCAAAATGACC
TATTGAAAACCATGGTTTTTGAACCCCTTCCCCCTTTCTGCTCAAAAAAA
AACCCCGGGCCCCTCCCCCCCTTTCTAAAAACAAGAACGGCTTTTTTTTG
GGACCTCCTCCTTCCTCAACAGCTATTATATCAAATCATCCTCAAATAAC
TCTGTCCACGAATACAATAAAAACACCTATAAAAGTGCGCTTCTTATGGG
GACACCGTCCCGAACTACGCCACCAACAGAACAGATATATTGCATTCTAT
TCACAATATCATGATTCTCGCACGAAACAGAAAACATTAACTTGTGCACT
CCTACACTCCCTTTTGCGCTGTCTTGTATCTCGTAGATACTTCAGACAAC
CGTCAAAACTCTCCCGTCTTCAACCCACATCTTCAGCGAAAACCAACGAG
AAGCCCTCGTCTCAAAGCGTCACAAAATATGCTCAGGTTTCGGCGTCTTC
ATCCTATACCTAAACCAACAGTCCCCGCGTCGCGCCCACTCTCTGCCGCA
CCACCCCATACCCAGCTCCGCGTATTCTCCTCAT
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