DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY270443_ssr95 microsatellite DY270443_ssr95:95..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3624 contig Ccv1_Contig3624:1..1102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.384e-60
Identity = 134/250 (53.60%), Postives = 146/250 (58.40%), Query Frame = 1
Query:  139 MDEDFDIPAANEXXXXXXXXXXXXXX----KVGEEKEIGNQXXXXXXXXXXXXWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVXXXXXXXXXXXXXXXXXXXWENPRTLMKFSLTTKLDLRMVWVLEKQMV*NFTVKMVISVPL*RKAERTMKKGKKDLLA*NPQLELGEKGNRPPGTKGPPP 876
            MD+DFDIPA ++                  KVGEE EIG Q            WDTPE GDEVEVHYTGTLLDG +FDSSRDR   FKF LGQG VIKGWD GIKTMKKGENA+FTIPPELAYGESGSPPTIP NATLQFDVELLSWTSV                   WENP+   +  +  +  L    V+ K     FTVK     P   KA +TMKKG+K LLA  PQ   GE G    G  G  P
Sbjct:    1 MDDDFDIPAGDDMMMGDGMGDFGGAEGPGMKVGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVP 250          

HSP 2 Score: 76.6406 bits (187), Expect = 2.828e-13
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  286 WDTPENGDEVEVHYTGTLLDGTQF-DSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYG--ESGSPPTIPPNATLQFDVELLSW 567
            ++ P  G  V V  TG L DGT F     D   PF+F   +  VI+G D  +  MKKGE A+ TIPPE AYG  ES     +PPN+T+ ++VEL+S+
Sbjct:  287 YERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 383          

HSP 3 Score: 72.4034 bits (176), Expect = 5.334e-12
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query:  286 WDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPT-----IPPNATLQFDVELLSWTSV 576
            W+ P++ DEV V Y   L DGT    S       +FT+  G++       +KTMKKGE  +  + P+  +GE G P       +PPNA+L  D+EL+SW +V
Sbjct:  170 WENPKDPDEVFVKYEARLEDGTVVSKSEG----VEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTV 267          

HSP 4 Score: 72.0182 bits (175), Expect = 6.939e-12
Identity = 48/127 (37.80%), Postives = 61/127 (48.03%), Query Frame = 3
Query:  630 KMGESQDLDEVLVNYEARLEDGMGVGKADGVKFHGKDGHFCPTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPGNKGASPPKATFQLRLELFSGKKGSQNPR*KEGVLQKILKKGERGLNPPREG 1010
            K    +D DEV V YEARLEDG  V K++GV+F  KDGH CP L                             A G  GA PP A+  + LEL S K  ++    K+ +L+K+LK+ E G   P EG
Sbjct:  169 KWENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKK-ILKKVLKEXE-GYERPNEG 293          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB70_ARATH (70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 7.596e-59
Identity = 128/220 (58.18%), Postives = 140/220 (63.64%), Query Frame = 1
Query:  217 KVGEEKEIGNQXXXXXXXXXXXXWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVXXXXXXXXXXXXXXXXXXXWENPRTLMKFSLTTKLDLRMVWVLEKQMV*NFTVKMVISVPL*RKAERTMKKGKKDLLA*NPQLELGEKGNRPPGTKGPPP 876
            KVGEEKEI  Q            ++TPENGDEVEVHYTGTLLDGT+FDSSRDR+TPFKFTLGQG VIKGWDIGIKTMKKGENAVFTIP ELAYGESGSPPTIP NATLQFDVELL W SV                   WENP+ L +  +  +  L    V+ K     FTVK     P   KA +TMKKG+K LL   PQ   GEKG      +G  P
Sbjct:   29 KVGEEKEI-QQGLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKWDSVKDICKDGGVFKKILAVGEKWENPKDLDEVLVKFEAKLEDGTVVGKSDGVEFTVKDGHFCPALTKAVKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVP 247          

HSP 2 Score: 84.7297 bits (208), Expect = 1.034e-15
Identity = 52/127 (40.94%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  630 KMGESQDLDEVLVNYEARLEDGMGVGKADGVKFHGKDGHFCPTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPGNKGASPPKATFQLRLELFSGKKGSQNPR*KEGVLQKILKKGERGLNPPREG 1010
            K    +DLDEVLV +EA+LEDG  VGK+DGV+F  KDGHFCP LT                            A   +GA PP AT ++ LEL S K  S+       V++K+LK+G+ G   P EG
Sbjct:  166 KWENPKDLDEVLVKFEAKLEDGTVVGKSDGVEFTVKDGHFCPALTKAVKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVPPNATLEINLELVSWKTVSEVTD-DNKVVKKVLKEGD-GYERPNEG 290          

HSP 3 Score: 75.485 bits (184), Expect = 6.301e-13
Identity = 58/207 (28.02%), Postives = 91/207 (43.96%), Query Frame = 1
Query:  286 WDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPT-----IPPNATLQFDVELLSWTSVXXXXXXXXXXXXXXXXXXXWENPR--TLMKFSLTTKLDLRMVWVL----EKQMV*NFTVKMVISVPL*RKAERTMKKGKKDLLA*NPQLELGEKGNRPPGTKGPP 873
            W+ P++ DEV V +   L DGT       +S   +FT+  G+        +KTMKKGE  + T+ P+  +GE G P +     +PPNATL+ ++EL+SW +V                   +E P    ++K  L  KL    V++     E +    F       V    +A   MKKG+  L+  +P+   G   ++      PP
Sbjct:  167 WENPKDLDEVLVKFEAKLEDGTVVG----KSDGVEFTVKDGHFCPALTKAVKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVPPNATLEINLELVSWKTVSEVTDDNKVVKKVLKEGDGYERPNEGAVVKVKLIGKLQDGTVFLKKGHGENEEPFEFKTDEEQVVDGLDRAVMKMKKGEVALVTIDPEYAFGSNESQQELAVVPP 369          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.231e-26
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP +G  V +HYTG L+DGT+FDSS  R+ PF+F+LG+GNVIK +D+G+ TMK GE    T  P  AYG +GSPP IPP+ATL F++E+L W
Sbjct:   27 ETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEMLGW 119          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 4.970e-26
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB12_DROME (12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 4.970e-26
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+NG +V VHYTGTL DGT+FDSSRDR+ PFKFT+G+G VI+GWD G+  +  G+ A     P+ AYG  G P  IPPN+TL FDVELL
Sbjct:   17 PKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHPGVIPPNSTLTFDVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_MOUSE (FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 118.627 bits (296), Expect = 6.490e-26
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGAAGSPPKIPPNATLVFEVELFEF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 1.446e-25
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETPMIGDRVFVHYTGWLLDGTKFDSSLDRKDRFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGLAGSPPKIPPNATLVFEVELFEF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.888e-25
Identity = 58/93 (62.37%), Postives = 64/93 (68.82%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            + P  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI I TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 EMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 4.207e-25
Identity = 57/93 (61.29%), Postives = 64/93 (68.82%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +T   GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETAMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNV (FK506-binding protein 1 OS=Cryptococcus neoformans var. grubii GN=FRR1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.224e-24
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ GD V +HY GTLLDG++FDSSRDR TPF   +GQG VI+GWD G+  +  G+ A     P+ AYG  G PP IPPN+TL+F+VELL
Sbjct:   17 PQPGDNVTIHYVGTLLDGSKFDSSRDRGTPFVCRIGQGQVIRGWDEGVPQLSVGQKANLICTPDYAYGARGFPPVIPPNSTLKFEVELL 105          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKB70_WHEAT1.384e-6053.6070 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKB70_ARATH7.596e-5958.1870 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKB59_DROME2.231e-2656.99FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKBP4_RABIT4.970e-2662.37FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKB12_DROME4.970e-2660.6712 kDa FK506-binding protein OS=Drosophila melanog... [more]
FKBP4_MOUSE6.490e-2662.37FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 P... [more]
FKBP4_BOVIN1.446e-2562.37FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKBP4_HUMAN1.888e-2562.37FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKBP4_RAT4.207e-2561.29FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP_CRYNV1.224e-2457.30FK506-binding protein 1 OS=Cryptococcus neoformans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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