DY270606

Overview
NameDY270606
Unique NameDY270606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3675 contig Ccv1_Contig3675:1..1286. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270606 vs. ExPASy Swiss-Prot
Match: GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis GN=guaD PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.520e-21
Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 2
Query:   62 DHE-FLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAK 364
            +HE FL +AV  A +GV  G GGPFGA             N V    DPTAHAEVTA+R+ACK L   +L DC +Y SCEPCPMC GAI+ +R K + Y A+
Sbjct:    2 NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAE 103          
BLAST of DY270606 vs. ExPASy Swiss-Prot
Match: TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus GN=tadA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.351e-14
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 2
Query:   71 FLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 361
            FL  A+ EA +  E G+  P GA            HN V +  DPTAHAE+ A++EAC++LN   L  CE+Y + EPC MC  A+ LSRI+++++ A
Sbjct:    6 FLKVALREAKRAFEKGEV-PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSA 101          
BLAST of DY270606 vs. ExPASy Swiss-Prot
Match: TADA_BACSU (tRNA-specific adenosine deaminase OS=Bacillus subtilis GN=tadA PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.544e-12
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 2
Query:   59 RDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 361
            +D  ++ +A++EA K  E G+  P GA            HN+        AHAE+  + EACK L    L    +Y + EPCPMC GA+ LSR++++V+GA
Sbjct:    3 QDELYMKEAIKEAKKAEEKGEV-PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDEACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA 102          
BLAST of DY270606 vs. ExPASy Swiss-Prot
Match: Y246_BUCAP (Uncharacterized protein BUsg_246 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_246 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.486e-11
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 2
Query:   56 DRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 361
            +RD  ++  A++ AY   E G+  P GA          +  N V+   D TAHAE+ A+REA + +    L +  +Y + +PC MC GAI  SRIKRLV+GA
Sbjct:    4 NRDSYWMKIALKYAYYAEENGEV-PIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALREAGRNIKNYRLVNTTLYVTLQPCMMCCGAIINSRIKRLVFGA 104          
BLAST of DY270606 vs. ExPASy Swiss-Prot
Match: Y255_BUCAI (Uncharacterized protein BU255 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU255 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.240e-11
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 2
Query:   56 DRDHEFLSKAVEEAYKGVECGDGGPFGAXXXXXXXXXXSCHNMVLKHTDPTAHAEVTAVREACKKLNKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 361
            ++D  ++  A++ AY   E G+  P GA             N  +   DPTAHAE+ A+R A KK+    L +  +Y + +PC MC GAI  SRIKRLV+GA
Sbjct:    4 EKDKNWMKIALKYAYYAKEKGEI-PIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGAGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGA 104          
The following BLAST results are available for this feature:
BLAST of DY270606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GUAD_BACSU4.520e-2150.98Guanine deaminase OS=Bacillus subtilis GN=guaD PE=... [more]
TADA_AQUAE5.351e-1442.27tRNA-specific adenosine deaminase OS=Aquifex aeoli... [more]
TADA_BACSU8.544e-1236.63tRNA-specific adenosine deaminase OS=Bacillus subt... [more]
Y246_BUCAP2.486e-1139.22Uncharacterized protein BUsg_246 OS=Buchnera aphid... [more]
Y255_BUCAI4.240e-1139.22Uncharacterized protein BU255 OS=Buchnera aphidico... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP7YC13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270606 ID=DY270606; Name=DY270606; organism=Citrus clementina; type=EST; length=1286bp
GGATGGAACTATTTTTGTGGCTTCTGCATTTGCTGCTCATCAGGAAGCTG
TACAGGATAGAGACCATGAGTTCCTAAGTAAAGCTGTTGAAGAAGCATAT
AAAGGAGTTGAATGTGGAGATGGGGGTCCTTTTGGTGCTGTTGTCGTACG
TAGTGATGAAGTTGTTGTAAGTTGTCATAACATGGTTTTGAAGCACACTG
ATCCTACTGCCCATGCTGAGGTGACGGCAGTGAGAGAGGCTTGCAAAAAG
CTCAATAAGATTGAGCTTTCAGACTGCGAAATATACGCCTCCTGTGAGCC
TTGCCCCATGTGCTTTGGGGCTATCCACCTTTCACGAATCAAGAGGTTGG
TTTATGGAGCCAAGGCTGAAGCAGCCATTGCCATAGGATTTGATGATTTC
ATTGCAGATGCAATAAGGGGAACTGGCTTCTATCAGAAGGCTCAGCTGGA
GATCAAAAGAGCTGATGGCAATGGGGCAGCCATAGCACAACAGGTCTTTG
AGAAGACAAAGGAAAAGTTCAAGATGGTTTTGATTTTTCATGTTACCCCT
TTTGTTTGATTGGAACTAACATTCATCCAATTCTATCATTGGCTTCGTTT
CTTTTTGGTGCCTATTTGCCAATCCTATATAAATATAATATAAAAACACC
TTTTCGTATGTATATAGTTATGTTTAATTAACAATAAAATGTTAAATAAA
ATTGTTGTACCAAATAGGCCGAATAGAGTTATTAATATTTCTCTAGCCGC
AATGCGGTTCGGGCTCACTATATTTATATTTAAAATACGAGTACAGATTC
ATGTTGATATTGAATACGTGTAAGCACCATTCATCTCTCTGAATAGTCAC
TACATAAGAAACTATTTACCCTATCTAAATACATCCCACGATGCAAATTC
ACACGACATACCTTATAACATCCGCTATGAATTAGGTTGTGTCATTGCAT
ACAATTATTTCTATAACCATTAAACACTCCTTCTTTGCATATCTCGACTA
TTTACTTTTCATTTGTTTGCACTCTTTTCAACCATATTATAATTCTTGTC
TTATTTGATCCCTTTTTAAATTGTTAACAATATCACTCACTGCTATCTCT
CTACTAATACTCTCCTTCCTCACCCATAATGCCTCATTCCACATCCATGT
GCTCCTCAGAGACCCTCCTTACACACGCGCACAGATCATCCTCTCCCCGT
GCCTCGCATTCTTACACTTTCAATACTCTCTTTCACATTTCTTTATATAC
TTTTTATCCTCATTATCGCTCTATACAATCCATTGC
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