DY270940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270940 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.397e-19 Identity = 64/202 (31.68%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 120 DGTIERYLNTVY---VPPGLDTATGVQSKDVVVSPETSVKARIFIPKIDGPPQK---------------------LPLLVHYHGGAFSIASAFDTNGTNYLNSLVSHGNIIAVSIDYRLAPEHPLPIAYDDSWAALQWVATHSNGSGPEPWLNKYADL-GRFCLEGESAGANIAHHVAVRAGSTGLAGLKITGVLAVHPFFG 650 DGT ER L VP GV S D ++ ++ RI+ +G ++ P+++ +HGG+F +SA T + V + VS++YR APEH P AYDD W AL+WV + +P++ D R L G+S+G NIAHHVAVRA G+K+ G + ++ FG Sbjct: 38 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFG 229
BLAST of DY270940 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.397e-19 Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 3 Query: 69 NTKQVTHDFPPYFKVYK--DGTIERYLNTVY---VPPGLDTATGVQSKDVVVSPETSVKARIFIPKI---DGPPQKL-----------PLLVHYHGGAFSIASAFDTNGTNYLNSLVSHGNIIAVSIDYRLAPEHPLPIAYDDSWAALQWVATHSNGSGPEPWLNKYADLG-RFCLEGESAGANIAHHVAVRAGSTGLAGLKITGVLAVHPFFG 650 NT + +F + + + DGT R+L V + GV S DV++ ++ +R++ P + PP L P+++ +HGG+F+ +SA LV + VS++YR APE+P P AYDD W AL WV + S WL D L G+S+G NIAH+VA+RAG +G+ + G + ++P FG Sbjct: 19 NTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS-------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFG 222
BLAST of DY270940 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.825e-19 Identity = 64/193 (33.16%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 120 DGTIERYLNTVY---VPPGLDTATGVQSKDVVVSPETSVKARIFIPKIDGPPQKL------------PLLVHYHGGAFSIASAFDTNGTNYLNSLVSHGNIIAVSIDYRLAPEHPLPIAYDDSWAALQWVATHSNGSGPEPWLNKYADLG-RFCLEGESAGANIAHHVAVRAGSTGLAGLKITGVLAVHPFFG 650 DGT R+L VP + GV S DV++ +T++ +R++ P G + P++V +HGG+F+ +SA LV + VS++YR APE+ P AYDD WA L+WV + S WL D R L G+S+G NI H+VAVRA + + + G + ++P FG Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS-------WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFG 220
BLAST of DY270940 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.310e-19 Identity = 73/215 (33.95%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 69 NTKQVTHDFPPYFKVYK--DGTIERYLNTVY---VPPGLDTATGVQSKDVVVSPETSVKARIFIP---------------KIDGPPQKLPLLVHYHGGAFSIASAFDTNGTNYLNSLVSHGNIIAVSIDYRLAPEHPLPIAYDDSWAALQWVATHSNGSGPEPWLNKYADLGRFC-LEGESAGANIAHHVAVRAGSTGLAGLKITGVLAVHPFFG 650 NT + +F +KV + DG+ R L VP GV S D V S T++ RI+ P K + +P+L+ +HGG+F+ +SA + LV+ ++ VS+DYR +PEH P AYDD W AL WV + WL D + L G+S+G NIAH+VAVRA + G+K+ G + +HP FG Sbjct: 19 NTWVLISNFKLAYKVLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFDHVDST-TNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS-------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFG 222 The following BLAST results are available for this feature:
BLAST of DY270940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270940 ID=DY270940; Name=DY270940; organism=Citrus clementina; type=EST; length=1252bpback to top |