DY271169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 1.229e-46 Identity = 86/97 (88.66%), Postives = 94/97 (96.91%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 317 MII E NRKEICKYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKKSAKP Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 4.669e-46 Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 317 MIIP+KNR EICKYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKS+EYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKKSA+P Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARP 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.963e-46 Identity = 84/97 (86.60%), Postives = 93/97 (95.88%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 317 MII E NR+EICKYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKKSAKP Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.828e-40 Identity = 79/98 (80.61%), Postives = 89/98 (90.82%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 317 MII E NR+EI KYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKK KP Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 98
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.487e-31 Identity = 62/97 (63.92%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAK 314 M++P++NR I +YLF+EGV AKKDY+ KHP+++ +PNLQVIK MQS KSR YV+E FAW H+YWYLTN+GIE+LR +L+LP EIVPATLK+S + Sbjct: 1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.126e-30 Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 317 M++ +KNR I +YLF+EGV AKKD++L KH EIDVPNL VI+ MQS SR YV+E F W HYYWYL N+GI++LR +L+LP EIVPATLK+ +P Sbjct: 1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRP 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.773e-29 Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 308 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.773e-29 Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 308 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_ICTPU (40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.773e-29 Identity = 60/100 (60.00%), Postives = 79/100 (79.00%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 317 M++P+KNR I + LF+EGV AKKD +LAKHPE+ +VPNL V+K MQS KS YV+E FAW H+YWYLTN+GI++LR +L+LP EIVPATL++ +P Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRP 100
BLAST of DY271169 vs. ExPASy Swiss-Prot
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.773e-29 Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 27 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 308 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97 The following BLAST results are available for this feature:
BLAST of DY271169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271169 ID=DY271169; Name=DY271169; organism=Citrus clementina; type=EST; length=968bpback to top |