DY271181

Overview
NameDY271181
Unique NameDY271181
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3851 contig Ccv1_Contig3851:1..918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271181 vs. ExPASy Swiss-Prot
Match: Y3684_ARATH (Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.463e-51
Identity = 100/165 (60.61%), Postives = 122/165 (73.94%), Query Frame = 2
Query:  302 EDEAETKQRVNVREYSEEESEGNG--KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN 790
            ++   T  +V    YS+ E+      K L D+ +EA + +    GGGPPRWFSPLECG+   +SPLLL+LPGIDG GLGLIR H++LG+IFDIWCLHIPV DRT    LVKL+E TV+SE+ R P RP+YLVGES+GAC+AL VAARNP+IDL LILVNPAT  N
Sbjct:   59 DENRATVAKVVENPYSKVEAARPDLQKRLSDFLEEAREFV--GDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEIFDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVN 221          
BLAST of DY271181 vs. ExPASy Swiss-Prot
Match: Y1457_ARATH (Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.138e-46
Identity = 91/173 (52.60%), Postives = 124/173 (71.68%), Query Frame = 2
Query:  281 KKSSELVEDEAETKQRVNVREYSEEESEGNG-KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS 796
            +K +  V  + ++K+++   E      +G G KS+KDYF  A++++K+   GGPPRWFSP++CG    D+P LLFLPG+DG G+GL+  H+ LGK F + CLHIPV DRT F GL+K+VE  +R E    P +P+YLVG+S G C+ALAVAARN  +DLVLILVNPATSF++S
Sbjct:   58 QKGANEVNGKGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKAD--GGPPRWFSPVDCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRS 228          
The following BLAST results are available for this feature:
BLAST of DY271181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3684_ARATH4.463e-5160.61Acyltransferase-like protein At3g26840, chloroplas... [more]
Y1457_ARATH1.138e-4652.60Acyltransferase-like protein At1g54570, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YB19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271181 ID=DY271181; Name=DY271181; organism=Citrus clementina; type=EST; length=918bp
AAAACATTCCAAGAACCTTACATAACATCACAAGTCACAAAAGCGCCACA
AAACAAACAGAGGGAGAGAGAAATTCTTACTTCGGTTCTAGATGGCGACG
GTCGGAGCTTGCATCTTTTCGGCCGTTTCCTCGCCGGTTTTTCGTCGACA
AATTACGTCGTCGTCCGAGAAGCCGAAACGGAATCCTATATTGAAGCGAG
TAGCGGTGTCAACGGAGCGGACGTCAGCTGCAACGACGACAGTGATGACG
GAAACGACGCCGACGAGGATATTTGTGGAGAAGAAGAGTAGCGAGTTAGT
AGAAGATGAAGCTGAGACGAAACAGAGAGTTAACGTGAGAGAATATTCGG
AGGAGGAGAGTGAAGGTAACGGAAAGAGCTTGAAAGATTACTTTGATGAA
GCCGAAGATATGATCAAATCGTCATCAGGCGGCGGTCCGCCCCGCTGGTT
CTCGCCGTTAGAATGCGGGTCCCACACTCGCGATTCTCCTCTCCTCCTCT
TTTTGCCTGGGATCGACGGTGTTGGACTTGGACTTATAAGACAGCATCAA
AGACTTGGAAAGATATTTGATATATGGTGCTTGCATATTCCAGTTAAGGA
TCGGACATCATTTACAGGTCTAGTAAAGCTGGTTGAAAGCACTGTAAGGT
CAGAGAGTAACCGTTCACCAAAGAGGCCCGTATATCTTGTTGGAGAATCT
CTTGGAGCTTGCATTGCACTTGCTGTCGCAGCCCGCAATCCTGACATCGA
TCTTGTACTAATTTTGGTCAATCCAGCCACATCTTTCAATAAGTCAGTGC
TGCCATCCTCAATACCTTTACTTGAGCTCATACCAGGGCAAAAAAACAAC
CATGGCGTCCTTCAACTTTGAGCTAAATGACAGGTGAATCCTTTTAAGAT
GGGCAATGGGACAAGGTG
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