DY271197

Overview
NameDY271197
Unique NameDY271197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKF4_ORYSJ (Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.377e-67
Identity = 132/207 (63.77%), Postives = 155/207 (74.88%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN*NC*FWPCP*N*LTSTVHGIRPHPMVSSS*SAASRHTCTPPKLIPRATE-----AIMAKFITPRPSFPG 801
            M+R+K+IKEVGDGTFGSVWRAI+KQ+GEVVA+KKMK+KYYS+EEC++LREVKSLR+M+HPNIVKLKEVIRENDILYF+ EYMEC+LYQLMKDR K FSEAEVRNWCFQ+FQ LAYMHQRGYFHRDLKPENLLVSKD      F       L   V  + P+    S+    +        +   A +     AIMA+ +T  P FPG
Sbjct:    1 MDRFKMIKEVGDGTFGSVWRAINKQNGEVVAVKKMKRKYYSFEECMSLREVKSLRRMNHPNIVKLKEVIRENDILYFIMEYMECNLYQLMKDRVKPFSEAEVRNWCFQIFQALAYMHQRGYFHRDLKPENLLVSKDVIKLADFG------LAREVTSVPPYTEYVSTRWYRAPEVLLQSSIYDSAVDMWAMGAIMAELLTLHPLFPG 201          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKF3_ORYSJ (Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica GN=CDKF-3 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 2.019e-60
Identity = 84/134 (62.69%), Postives = 115/134 (85.82%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS 597
            MERYK+I+E+GDGT G+V+RA + ++ E+VA+KKMK+K++ WEEC++LREVK+L+K++HPNIVKLKEV  EN  L+F+FE MEC+LY ++++R+  FSE E+RN+  Q+ QGLAYMH  GYFHRDLKPENLLV+
Sbjct:    1 MERYKVIREIGDGTCGNVFRAYNTETNEIVAVKKMKRKFFQWEECISLREVKALQKLNHPNIVKLKEVTMENHELFFIFENMECNLYDVIRERQAAFSEEEIRNFMVQILQGLAYMHNNGYFHRDLKPENLLVT 134          

HSP 2 Score: 60.8474 bits (146), Expect = 2.019e-60
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 2
Query:  605 TIKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            T+KIAD GLARE++S PP+T+YV TRWYRAPEVL
Sbjct:  137 TVKIADFGLAREVSSSPPYTDYVSTRWYRAPEVL 170          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: ICK_RAT (Serine/threonine-protein kinase ICK OS=Rattus norvegicus GN=Ick PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.817e-60
Identity = 88/132 (66.67%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL 591
            M RY  IK++GDGT+GSV    S +SGE++AIKKMK+K+YSWEEC+NLREVKSL+K++H NIVKLKEVIREND LYF+FEYM+ +LYQL+K+R K F E+ +RN  +Q+ QGLA++H+ G+FHRDLKPENLL
Sbjct:    1 MNRYTTIKQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANIVKLKEVIRENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLL 132          

HSP 2 Score: 61.2326 bits (147), Expect = 5.817e-60
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +KIAD GLAREI SRPP+T+YV TRWYRAPEVL
Sbjct:  139 VKIADFGLAREIRSRPPYTDYVSTRWYRAPEVL 171          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: ICK_MOUSE (Serine/threonine-protein kinase ICK OS=Mus musculus GN=Ick PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 5.817e-60
Identity = 88/132 (66.67%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL 591
            M RY  IK++GDGT+GSV    S +SGE++AIKKMK+K+YSWEEC+NLREVKSL+K++H NIVKLKEVIREND LYF+FEYM+ +LYQL+K+R K F E+ +RN  +Q+ QGLA++H+ G+FHRDLKPENLL
Sbjct:    1 MNRYTTIKQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANIVKLKEVIRENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLL 132          

HSP 2 Score: 61.2326 bits (147), Expect = 5.817e-60
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +KIAD GLAREI SRPP+T+YV TRWYRAPEVL
Sbjct:  139 VKIADFGLAREIRSRPPYTDYVSTRWYRAPEVL 171          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MAK_MOUSE (Serine/threonine-protein kinase MAK OS=Mus musculus GN=Mak PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.858e-59
Identity = 86/132 (65.15%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL 591
            M RY  +K++GDGT+GSV    S +SGE+VAIK+MK+K+YSW+EC+NLREVKSL+K++H N++KLKEVIREND LYFVFEYM+ +LYQLMKDR K F E+ +RN  +Q+ QGLA++H+ G+FHRD+KPENLL
Sbjct:    1 MNRYTTMKQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFVFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLL 132          

HSP 2 Score: 58.9214 bits (141), Expect = 2.858e-59
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +KIAD GLARE+ S+PP+T+YV TRWYRAPEVL
Sbjct:  139 VKIADFGLARELRSQPPYTDYVSTRWYRAPEVL 171          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: ICK_HUMAN (Serine/threonine-protein kinase ICK OS=Homo sapiens GN=ICK PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.725e-59
Identity = 86/132 (65.15%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL 591
            M RY  I+++GDGT+GSV    S +SGE++AIKKMK+K+YSWEEC+NLREVKSL+K++H N+VKLKEVIREND LYF+FEYM+ +LYQL+K+R K F E+ +RN  +Q+ QGLA++H+ G+FHRDLKPENLL
Sbjct:    1 MNRYTTIRQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANVVKLKEVIRENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLL 132          

HSP 2 Score: 60.077 bits (144), Expect = 3.725e-59
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +KIAD GLAREI S+PP+T+YV TRWYRAPEVL
Sbjct:  139 VKIADFGLAREIRSKPPYTDYVSTRWYRAPEVL 171          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MAK_HUMAN (Serine/threonine-protein kinase MAK OS=Homo sapiens GN=MAK PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 3.726e-59
Identity = 84/132 (63.64%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL 591
            M RY  ++++GDGT+GSV    S +SGE+VAIK+MK+K+YSW+EC+NLREVKSL+K++H N++KLKEVIREND LYF+FEYM+ +LYQLMKDR K F E+ +RN  +Q+ QGLA++H+ G+FHRD+KPENLL
Sbjct:    1 MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLL 132          

HSP 2 Score: 60.077 bits (144), Expect = 3.726e-59
Identity = 35/72 (48.61%), Postives = 42/72 (58.33%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSW------PNLLLPAPLFPGT 805
            +KIAD GLARE+ S+PP+T+YV TRWYRAPEVL       L+S         W        L +  PLFPGT
Sbjct:  139 VKIADFGLARELRSQPPYTDYVSTRWYRAPEVL-------LRSSVYSSPIDVWAVGSIMAELYMLRPLFPGT 203          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MAK_RAT (Serine/threonine-protein kinase MAK OS=Rattus norvegicus GN=Mak PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.257e-59
Identity = 84/132 (63.64%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL 591
            M RY  ++++GDGT+GSV    S +SGE+VAIK+MK+K+YSW+EC+NLREVKSL+K++H N++KLKEVIREND LYF+FEYM+ +LYQLMKDR K F E+ +RN  +Q+ QGLA++H+ G+FHRD+KPENLL
Sbjct:    1 MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLL 132          

HSP 2 Score: 58.9214 bits (141), Expect = 8.257e-59
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +KIAD GLARE+ S+PP+T+YV TRWYRAPEVL
Sbjct:  139 VKIADFGLARELRSQPPYTDYVSTRWYRAPEVL 171          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MHK_ARATH (Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.393e-58
Identity = 83/136 (61.03%), Postives = 120/136 (88.24%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            M RYK+++E+GDGT GSV++A++ ++ EVVA+KKMK+K+Y WEECVNLREVK+LRK++HP+I+KLKE++RE++ L+F+FE M+ +LY +MK+RE+ FSE E+R++  Q+ QGLA+MH+ GYFHRDLKPENLLV+ +
Sbjct:    9 MCRYKILEELGDGTCGSVYKAVNLETYEVVAVKKMKRKFYYWEECVNLREVKALRKLNHPHIIKLKEIVREHNELFFIFECMDHNLYHIMKERERPFSEGEIRSFMSQMLQGLAHMHKNGYFHRDLKPENLLVTNN 144          

HSP 2 Score: 58.9214 bits (141), Expect = 2.393e-58
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 2
Query:  590 LFQKTTIKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            L     +KIAD GLARE+ S PP+TEYV TRWYRAPEVL
Sbjct:  140 LVTNNILKIADFGLAREVASMPPYTEYVSTRWYRAPEVL 178          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: Y8078_DICDI (Probable serine/threonine-protein kinase DDB_G0268078 OS=Dictyostelium discoideum GN=DDB_G0268078 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.639e-53
Identity = 74/133 (55.64%), Postives = 104/133 (78.20%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV 594
            ME+Y+ IK+VGDG +G V +AI  ++GE+VAIK+MKKK+  W+EC+ LRE+K+L+K+ HPNIVKL E+I E D L+FVFEY+E +LY+ +KDR K   E  +RN  +Q+ Q L +MH  G+FHRDLKPEN+++
Sbjct:    1 MEKYQFIKQVGDGAYGDVIKAIDVKTGEIVAIKRMKKKFSDWKECIQLREIKALKKLKHPNIVKLLEIILERDELFFVFEYLENNLYESIKDRTKLLPETTIRNIIYQILQALHFMHTNGFFHRDLKPENIML 133          

HSP 2 Score: 60.4622 bits (145), Expect = 3.639e-53
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +KIAD GLAREI S+PPFT+Y+ TRWYRAPEVL
Sbjct:  138 LKIADFGLAREIESKPPFTDYISTRWYRAPEVL 170          
The following BLAST results are available for this feature:
BLAST of DY271197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKF4_ORYSJ7.377e-6763.77Cyclin-dependent kinase F-4 OS=Oryza sativa subsp.... [more]
CDKF3_ORYSJ2.019e-6062.69Cyclin-dependent kinase F-3 OS=Oryza sativa subsp.... [more]
ICK_RAT5.817e-6066.67Serine/threonine-protein kinase ICK OS=Rattus norv... [more]
ICK_MOUSE5.817e-6066.67Serine/threonine-protein kinase ICK OS=Mus musculu... [more]
MAK_MOUSE2.858e-5965.15Serine/threonine-protein kinase MAK OS=Mus musculu... [more]
ICK_HUMAN3.725e-5965.15Serine/threonine-protein kinase ICK OS=Homo sapien... [more]
MAK_HUMAN3.726e-5963.64Serine/threonine-protein kinase MAK OS=Homo sapien... [more]
MAK_RAT8.257e-5963.64Serine/threonine-protein kinase MAK OS=Rattus norv... [more]
MHK_ARATH2.393e-5861.03Serine/threonine-protein kinase MHK OS=Arabidopsis... [more]
Y8078_DICDI3.639e-5355.64Probable serine/threonine-protein kinase DDB_G0268... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271197 ID=DY271197; Name=DY271197; organism=Citrus clementina; type=EST; length=900bp
GAAAACTTCTTGGTTTGTTCTCTCGCATATAGCTACGCAAAATTAATGTT
GGACTCAGCTGGACCAGTGGAACATTTTGTTTAAATTTAACAGTTTTTTC
TAGCAATTATCTTGGTACAATAAATGTCATATAACTTCAAAGGTTCTTAC
ACTTTTCTTGAATAAAGAAAGAGCTGTTTCTGTTCCACAAGGAAAATGGA
AAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCT
GGCGAGCTATTAGTAAGCAGTCTGGTGAAGTTGTTGCAATTAAAAAAATG
AAGAAAAAATATTATTCCTGGGAGGAGTGTGTCAATTTGAGAGAAGTTAA
GTCGCTACGGAAAATGAGTCATCCAAACATTGTGAAGCTTAAGGAAGTCA
TCCGGGAAAATGATATCTTGTACTTTGTTTTTGAATACATGGAATGTAGC
CTTTACCAACTTATGAAAGACAGAGAGAAGTGTTTCTCTGAAGCTGAAGT
CAGAAATTGGTGTTTCCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGC
GGGGATATTTTCATCGTGACCTTAAGCCTGAGAACTTGCTTGTTTCAAAA
GACCACAATTAAAATTGCTGATTCTGGCCTTGCCCGTGAAATTAACTCAC
GTCCACCGTTCACGGAATACGTCCTCACCCGATGGTATCGAGCTCCTGAA
GTGCTGCCTCCAGACATACCTGCACACCTCCAAAGTTGATTCCTCGGGCA
ACGGAGGCTATCATGGCCAAATTTATTACTCCCCGCCCCTCTTTTCCCGG
GTACCCCCGGAACCCAATCTAAATGATCAAACCTCGTAGTGTATAAAGCC
ATCCCCACCACGGGAAATCTGGGACAGCAAGACACCCCTCCCGCGGTGAA
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