DY271230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 3.673e-63 Identity = 124/180 (68.89%), Postives = 144/180 (80.00%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXAKKVHFRNSQIS 674 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ DSCMER+LERYERY +AERQL + G+WTLE++KLKAR+EVLQRNQKH++GEDL L++KELQ++E Q+DS LK IRSRKNQLM +SIS +KKV R +++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVA 180
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.182e-61 Identity = 117/152 (76.97%), Postives = 138/152 (90.79%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRGRVQLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTDSCME+ILERYERY YAERQL A E + N NW++EY++LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IRSRKNQLM SI+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSIN 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 1.182e-61 Identity = 116/152 (76.32%), Postives = 139/152 (91.45%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRGRVQLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTDSCME+ILERYERY YAERQL A E + N NW++EY++LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IR+RKNQLM +SI+ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESIN 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.543e-61 Identity = 127/185 (68.65%), Postives = 143/185 (77.30%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXAKKVHFRN---SQISAL 680 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ DSCMERILERYERY +AE+QL + +WTLE+ KLKAR+EVLQRNQKH++GEDL LS+KELQ++E Q+DS LK IRSRKNQLM +SIS +KKV R QIS + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKSAQQISGI 185
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.543e-61 Identity = 116/152 (76.32%), Postives = 137/152 (90.13%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFS+KGKLFEYSTDSCMERILERY+RY Y+++QL ++ + NW LE++KLKAR+EVL++N+++FMGEDL LSLKELQS+E Q+D+ +K IRSRKNQ M +SIS Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESIS 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.911e-60 Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXAKKVHFRNSQI 671 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+TDSCMER+LERYERY +AE+QL + G+WTLE +KLKAR+EVLQRN+K ++GEDL L++KELQ++E Q+ S LK IRSRKNQLM +SIS +KKV R ++ Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEV 179
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.911e-60 Identity = 113/152 (74.34%), Postives = 136/152 (89.47%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVAL++FS+KGKLFEYSTDSCME+ILERY+RY Y+++QL +I + NW LE++KLKAR+EVL++N+++FMGEDL LSLKELQS+E Q+ + +K IRSRKNQ M +SIS Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESIS 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 2.086e-58 Identity = 112/152 (73.68%), Postives = 134/152 (88.16%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRG+VQLKRIENKINRQVTFSKRRSGLLKKA+EISVLCDAEVALI+FSTKGKL+EY+TDSCM++ILERYERY YAE+ L + E + GNW EY KLKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 3.012e-57 Identity = 110/152 (72.37%), Postives = 133/152 (87.50%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRG+VQLKRIEN INRQVTFSKRRSGLLKKA+EISVLCDAEVALI+FSTKGKL++Y+TDSCM++ILERYERY YAE+ L + E + GNW EY KLKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 222.246 bits (565), Expect = 3.934e-57 Identity = 109/154 (70.78%), Postives = 138/154 (89.61%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG--NWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 590 MGRGRV+LKRIENKINRQVTFSKRR+GLLKKA EISVLCDAEV+LIVFS KGKLFEYS++SCME++LERYERY YAERQL A + N NW++EYS+LKA++E+L+RNQ+H++GE+L +SLK+LQ++EQQ+++ LK IRSRKNQLM +S++ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLN 154 The following BLAST results are available for this feature:
BLAST of DY271230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271230 ID=DY271230; Name=DY271230; organism=Citrus clementina; type=EST; length=1063bpback to top |