DY271427

Overview
NameDY271427
Unique NameDY271427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length958
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.299e-21
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 270
            MSDTC NC CAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.996e-17
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 1
Query:   82 TCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 273
            TC NC C D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.305e-16
Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 267
            MSD C NC CAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.485e-15
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 267
            MS  C NC C+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.485e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 270
            MS  C NC CAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.351e-13
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 270
            MSD C NC CAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.351e-13
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 270
            MSD C NC CAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.157e-11
Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 270
            MSD C NC CAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DY271427 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.196e-11
Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 1
Query:   73 MSDTCRNCHCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 270
            MSD C +C CAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DY271427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA2.299e-2166.67Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC9.996e-1757.81Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.305e-1664.62Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV5.485e-1556.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO5.485e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.351e-1351.52Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.351e-1351.52Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ2.157e-1146.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI8.196e-1145.45Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YP07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271427 ID=DY271427; Name=DY271427; organism=Citrus clementina; type=EST; length=958bp
GCAAAGCCCCTTTCGTACCATAAAGAGCCCTCTATTTCCAGTTTTAAGTT
CTAAGTTCTAAGCTCAATCCACATGTCGGACACCTGCCGCAACTGCCACT
GCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGCTGAC
TTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGTCATGGACGT
TCAGGCTGCTGAGGCTGAAGGTAACTGCAAGTGCGGCCCCACCTGCGCTT
GTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACACATGCAGCAAA
AAATAAGAAGCTGCCAGTGTGCCTAAATATTGTGGGGGTTAAGAATAATG
TAAGGGTGATTAAAAAAAAAAAGAAAAATTCCCCACTTCGTTTTTATGAT
GGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCACCCATCCAC
TCGTAATGTTTTGTGTTTCCTTCTTCCTAATCACGTAATATATGGCCATG
GCCCTGACCGTGGCCTTGTGTGGTTTAATTTTAATGGATTATTGTTAGTC
TAAAAAAAAAAAAAAAAAAAAAAACCCACCTTTCCCTGCCAAAAGTTGGC
ATTTAAAACAAAGCCTCGCTTTCCAATTTGTCGCCCCCGAACCCGTCACC
ATTCCGTCCAAATACAATCCTTATTTCCCCCCCCCGCCGATATTCCCCTC
CAATCGAATCGCAATACACGGGACACACCCGGCCTTCCCGGGACCCCCCC
GCCCCCCGGGCCCCAAAATCCCTGGGGCCTAACCTGGCCCCACAGGATAA
ACATTACACCACACGTGTGGGACAACCCCCCCGGGCCCCCCACAGAGACA
GCCCACCTTAACCCACACACGAGACCACCCCAACCCACGCTTCACAAACA
ACCCCCTCTCCCAACGCCCGAGTACAACCCCCCCCCGCCCCCTCTCTCCA
CGACCCCC
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