Citrus-C.sinensis-consensus-2018

Map Overview

Click on any linkage group to explore this map further. You will be taken to MapViewer and leave this page.

NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 features:
Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG011_1906341_190634marker_locus0 cM
Citrus-C.sinensis-consensus-2018.LG011_4474331_447433marker_locus2.29 cM
Citrus-C.sinensis-consensus-2018.LG011_18071091_1807109marker_locus13.46 cM
Citrus-C.sinensis-consensus-2018.LG011_24882681_2488268marker_locus15.54 cM
Citrus-C.sinensis-consensus-2018.LG011_27452541_2745254marker_locus18.76 cM
Citrus-C.sinensis-consensus-2018.LG011_30490661_3049066marker_locus20.92 cM
Citrus-C.sinensis-consensus-2018.LG011_36077221_3607722marker_locus29.31 cM
Citrus-C.sinensis-consensus-2018.LG011_28540841_2854084marker_locus35.69 cM
Citrus-C.sinensis-consensus-2018.LG011_51276291_5127629marker_locus36.58 cM
Citrus-C.sinensis-consensus-2018.LG011_69155461_6915546marker_locus37.08 cM
Citrus-C.sinensis-consensus-2018.LG011_73673791_7367379marker_locus37.69 cM
Citrus-C.sinensis-consensus-2018.LG011_54754171_5475417marker_locus38.25 cM
Citrus-C.sinensis-consensus-2018.LG011_71172301_7117230marker_locus38.38 cM
Citrus-C.sinensis-consensus-2018.LG011_64501111_6450111marker_locus38.58 cM
Citrus-C.sinensis-consensus-2018.LG011_74194381_7419438marker_locus39.23 cM
Citrus-C.sinensis-consensus-2018.LG011_82433041_8243304marker_locus41.29 cM
Citrus-C.sinensis-consensus-2018.LG011_79086271_7908627marker_locus41.68 cM
Citrus-C.sinensis-consensus-2018.LG011_96700021_9670002marker_locus42.45 cM
Citrus-C.sinensis-consensus-2018.LG011_95175341_9517534marker_locus42.63 cM
Citrus-C.sinensis-consensus-2018.LG011_104102761_10410276marker_locus42.67 cM
Citrus-C.sinensis-consensus-2018.LG011_128757861_12875786marker_locus42.92 cM
Citrus-C.sinensis-consensus-2018.LG011_115241641_11524164marker_locus43.18 cM
Citrus-C.sinensis-consensus-2018.LG011_112304561_11230456marker_locus44.27 cM
Citrus-C.sinensis-consensus-2018.LG011_165784881_16578488marker_locus46.11 cM
Citrus-C.sinensis-consensus-2018.LG011_174298901_17429890marker_locus47.33 cM
Page
1
...
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
View Map