Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG033_391299613_39129961marker_locus53.91 cM
Citrus-C.sinensis-consensus-2018.LG033_389441453_38944145marker_locus54 cM
Citrus-C.sinensis-consensus-2018.LG033_384952423_38495242marker_locus54.37 cM
Citrus-C.sinensis-consensus-2018.LG033_397233063_39723306marker_locus54.78 cM
Citrus-C.sinensis-consensus-2018.LG033_400060943_40006094marker_locus55.19 cM
Citrus-C.sinensis-consensus-2018.LG033_399971353_39997135marker_locus55.53 cM
Citrus-C.sinensis-consensus-2018.LG033_402469603_40246960marker_locus55.92 cM
Citrus-C.sinensis-consensus-2018.LG033_404432273_40443227marker_locus57.13 cM
Citrus-C.sinensis-consensus-2018.LG033_412404303_41240430marker_locus57.88 cM
Citrus-C.sinensis-consensus-2018.LG033_409540823_40954082marker_locus58.11 cM
Citrus-C.sinensis-consensus-2018.LG033_410400903_41040090marker_locus58.43 cM
Citrus-C.sinensis-consensus-2018.LG033_417341573_41734157marker_locus59.33 cM
Citrus-C.sinensis-consensus-2018.LG033_421110963_42111096marker_locus59.75 cM
Citrus-C.sinensis-consensus-2018.LG033_419762883_41976288marker_locus59.9 cM
Citrus-C.sinensis-consensus-2018.LG033_415156103_41515610marker_locus59.96 cM
Citrus-C.sinensis-consensus-2018.LG033_423230083_42323008marker_locus60.36 cM
Citrus-C.sinensis-consensus-2018.LG033_425350553_42535055marker_locus61.17 cM
Citrus-C.sinensis-consensus-2018.LG033_426827403_42682740marker_locus61.57 cM
Citrus-C.sinensis-consensus-2018.LG033_431846003_43184600marker_locus61.73 cM
Citrus-C.sinensis-consensus-2018.LG033_433751303_43375130marker_locus61.86 cM
Citrus-C.sinensis-consensus-2018.LG033_429818523_42981852marker_locus62.18 cM
Citrus-C.sinensis-consensus-2018.LG033_438175543_43817554marker_locus62.42 cM
Citrus-C.sinensis-consensus-2018.LG033_441949373_44194937marker_locus65.52 cM
Citrus-C.sinensis-consensus-2018.LG033_442834483_44283448marker_locus67.27 cM
Citrus-C.sinensis-consensus-2018.LG033_444415253_44441525marker_locus69.1 cM
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Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
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