Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG033_448685413_44868541marker_locus73.04 cM
Citrus-C.sinensis-consensus-2018.LG033_456072043_45607204marker_locus77.18 cM
Citrus-C.sinensis-consensus-2018.LG033_458953863_45895386marker_locus79.31 cM
Citrus-C.sinensis-consensus-2018.LG033_462003643_46200364marker_locus79.85 cM
Citrus-C.sinensis-consensus-2018.LG033_464753213_46475321marker_locus81.13 cM
Citrus-C.sinensis-consensus-2018.LG033_466604333_46660433marker_locus81.79 cM
Citrus-C.sinensis-consensus-2018.LG033_469517913_46951791marker_locus83.36 cM
Citrus-C.sinensis-consensus-2018.LG033_471188523_47118852marker_locus85.55 cM
Citrus-C.sinensis-consensus-2018.LG033_475509963_47550996marker_locus90.14 cM
Citrus-C.sinensis-consensus-2018.LG033_478860273_47886027marker_locus92.01 cM
Citrus-C.sinensis-consensus-2018.LG033_484550353_48455035marker_locus95.37 cM
Citrus-C.sinensis-consensus-2018.LG033_488342303_48834230marker_locus96.95 cM
Citrus-C.sinensis-consensus-2018.LG033_495096363_49509636marker_locus99.09 cM
Citrus-C.sinensis-consensus-2018.LG033_504498353_50449835marker_locus105.26 cM
Citrus-C.sinensis-consensus-2018.LG044_1283104_128310marker_locus0 cM
Citrus-C.sinensis-consensus-2018.LG044_3427974_342797marker_locus1.63 cM
Citrus-C.sinensis-consensus-2018.LG044_4590094_459009marker_locus2.35 cM
Citrus-C.sinensis-consensus-2018.LG044_6335674_633567marker_locus3.39 cM
Citrus-C.sinensis-consensus-2018.LG044_8176804_817680marker_locus4.36 cM
Citrus-C.sinensis-consensus-2018.LG044_10987584_1098758marker_locus6.05 cM
Citrus-C.sinensis-consensus-2018.LG044_13207824_1320782marker_locus6.51 cM
Citrus-C.sinensis-consensus-2018.LG044_14693744_1469374marker_locus6.59 cM
Citrus-C.sinensis-consensus-2018.LG044_17932204_1793220marker_locus7.55 cM
Citrus-C.sinensis-consensus-2018.LG044_19774524_1977452marker_locus8.3 cM
Citrus-C.sinensis-consensus-2018.LG044_21394654_2139465marker_locus8.54 cM
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Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
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