Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG044_122156824_12215682marker_locus19.11 cM
Citrus-C.sinensis-consensus-2018.LG042_42039662_4203966marker_locus19.31 cM
Citrus-C.sinensis-consensus-2018.LG044_117910364_11791036marker_locus19.48 cM
Citrus-C.sinensis-consensus-2018.LG044_125731424_12573142marker_locus19.7 cM
Citrus-C.sinensis-consensus-2018.LG044_115230884_11523088marker_locus20.47 cM
Citrus-C.sinensis-consensus-2018.LG044_138265704_13826570marker_locus21.61 cM
Citrus-C.sinensis-consensus-2018.LG044_128869794_12886979marker_locus21.66 cM
Citrus-C.sinensis-consensus-2018.LG044_145258934_14525893marker_locus21.78 cM
Citrus-C.sinensis-consensus-2018.LG044_140000244_14000024marker_locus21.89 cM
Citrus-C.sinensis-consensus-2018.LG044_160858394_16085839marker_locus22.06 cM
Citrus-C.sinensis-consensus-2018.LG044_152782174_15278217marker_locus22.4 cM
Citrus-C.sinensis-consensus-2018.LG044_157990954_15799095marker_locus22.51 cM
Citrus-C.sinensis-consensus-2018.LG044_150493904_15049390marker_locus22.81 cM
Citrus-C.sinensis-consensus-2018.LG044_159099674_15909967marker_locus23.11 cM
Citrus-C.sinensis-consensus-2018.LG044_155520774_15552077marker_locus23.7 cM
Citrus-C.sinensis-consensus-2018.LG044_166537274_16653727marker_locus26.33 cM
Citrus-C.sinensis-consensus-2018.LG044_163344284_16334428marker_locus26.94 cM
Citrus-C.sinensis-consensus-2018.LG044_164295404_16429540marker_locus27.37 cM
Citrus-C.sinensis-consensus-2018.LG044_173684644_17368464marker_locus28.63 cM
Citrus-C.sinensis-consensus-2018.LG044_180651614_18065161marker_locus30.23 cM
Citrus-C.sinensis-consensus-2018.LG044_178352854_17835285marker_locus30.28 cM
Citrus-C.sinensis-consensus-2018.LG044_177121254_17712125marker_locus30.61 cM
Citrus-C.sinensis-consensus-2018.LG044_183168724_18316872marker_locus30.73 cM
Citrus-C.sinensis-consensus-2018.LG044_184669974_18466997marker_locus32.18 cM
Citrus-C.sinensis-consensus-2018.LG044_187599164_18759916marker_locus32.55 cM
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Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
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