Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG044_191739524_19173952marker_locus33.29 cM
Citrus-C.sinensis-consensus-2018.LG044_189036644_18903664marker_locus33.62 cM
Citrus-C.sinensis-consensus-2018.LG044_192816074_19281607marker_locus33.98 cM
Citrus-C.sinensis-consensus-2018.LG044_195840844_19584084marker_locus36.49 cM
Citrus-C.sinensis-consensus-2018.LG044_196559324_19655932marker_locus37.72 cM
Citrus-C.sinensis-consensus-2018.LG044_200924194_20092419marker_locus39.84 cM
Citrus-C.sinensis-consensus-2018.LG044_199621794_19962179marker_locus39.95 cM
Citrus-C.sinensis-consensus-2018.LG044_202788304_20278830marker_locus43.25 cM
Citrus-C.sinensis-consensus-2018.LG044_204512694_20451269marker_locus46.12 cM
Citrus-C.sinensis-consensus-2018.LG044_208257494_20825749marker_locus46.49 cM
Citrus-C.sinensis-consensus-2018.LG044_207827944_20782794marker_locus46.78 cM
Citrus-C.sinensis-consensus-2018.LG044_212439414_21243941marker_locus47.56 cM
Citrus-C.sinensis-consensus-2018.LG044_211543844_21154384marker_locus47.98 cM
Citrus-C.sinensis-consensus-2018.LG044_214010664_21401066marker_locus49.35 cM
Citrus-C.sinensis-consensus-2018.LG044_216133224_21613322marker_locus51.86 cM
Citrus-C.sinensis-consensus-2018.LG044_218233994_21823399marker_locus52.74 cM
Citrus-C.sinensis-consensus-2018.LG044_221905784_22190578marker_locus54.47 cM
Citrus-C.sinensis-consensus-2018.LG044_223665064_22366506marker_locus56.53 cM
Citrus-C.sinensis-consensus-2018.LG044_225259064_22525906marker_locus58.38 cM
Citrus-C.sinensis-consensus-2018.LG044_226820304_22682030marker_locus58.63 cM
Citrus-C.sinensis-consensus-2018.LG044_229675764_22967576marker_locus59.23 cM
Citrus-C.sinensis-consensus-2018.LG044_232511774_23251177marker_locus60.86 cM
Citrus-C.sinensis-consensus-2018.LG044_235463974_23546397marker_locus62.01 cM
Citrus-C.sinensis-consensus-2018.LG044_236106904_23610690marker_locus62.6 cM
Citrus-C.sinensis-consensus-2018.LG044_238879104_23887910marker_locus66.41 cM
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Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
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