Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG044_241108764_24110876marker_locus66.53 cM
Citrus-C.sinensis-consensus-2018.LG044_243038124_24303812marker_locus68.47 cM
Citrus-C.sinensis-consensus-2018.LG044_245454614_24545461marker_locus69.64 cM
Citrus-C.sinensis-consensus-2018.LG044_246351714_24635171marker_locus70.5 cM
Citrus-C.sinensis-consensus-2018.LG044_248941884_24894188marker_locus71.41 cM
Citrus-C.sinensis-consensus-2018.LG044_254339114_25433911marker_locus72.08 cM
Citrus-C.sinensis-consensus-2018.LG044_251978374_25197837marker_locus72.96 cM
Citrus-C.sinensis-consensus-2018.LG044_253657534_25365753marker_locus73.98 cM
Citrus-C.sinensis-consensus-2018.LG055_4808105_480810marker_locus0 cM
Citrus-C.sinensis-consensus-2018.LG055_2802095_280209marker_locus0.94 cM
Citrus-C.sinensis-consensus-2018.LG055_2652025_265202marker_locus1.08 cM
Citrus-C.sinensis-consensus-2018.LG055_8175965_817596marker_locus3.67 cM
Citrus-C.sinensis-consensus-2018.LG055_22725465_2272546marker_locus7.35 cM
Citrus-C.sinensis-consensus-2018.LG055_30036145_3003614marker_locus8.34 cM
Citrus-C.sinensis-consensus-2018.LG055_44129795_4412979marker_locus9.48 cM
Citrus-C.sinensis-consensus-2018.LG055_50899995_5089999marker_locus11.03 cM
Citrus-C.sinensis-consensus-2018.LG055_47632425_4763242marker_locus11.38 cM
Citrus-C.sinensis-consensus-2018.LG055_68740615_6874061marker_locus12.48 cM
Citrus-C.sinensis-consensus-2018.LG055_59997755_5999775marker_locus13.99 cM
Citrus-C.sinensis-consensus-2018.LG055_52888195_5288819marker_locus14.51 cM
Citrus-C.sinensis-consensus-2018.LG055_60258035_6025803marker_locus14.56 cM
Citrus-C.sinensis-consensus-2018.LG055_91688685_9168868marker_locus14.97 cM
Citrus-C.sinensis-consensus-2018.LG055_92035215_9203521marker_locus15.59 cM
Citrus-C.sinensis-consensus-2018.LG055_85288395_8528839marker_locus15.7 cM
Citrus-C.sinensis-consensus-2018.LG055_67294755_6729475marker_locus15.9 cM
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Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
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