Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Publication
YearPublications
2018Huang M, Roose ML, Yu Q, Du D, Yu Y, Zhang Y, Deng Z, Stover E, Gmitter FG. Construction of High-Density Genetic Maps and Detection of QTLs Associated With Huanglongbing Tolerance in Citrus.. Frontiers in plant science. 2018; 9:1694.
Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG055_357534985_35753498marker_locus48.7 cM
Citrus-C.sinensis-consensus-2018.LG055_359348655_35934865marker_locus50.43 cM
Citrus-C.sinensis-consensus-2018.LG055_360713165_36071316marker_locus51.5 cM
Citrus-C.sinensis-consensus-2018.LG055_364268685_36426868marker_locus51.97 cM
Citrus-C.sinensis-consensus-2018.LG055_368253835_36825383marker_locus53.21 cM
Citrus-C.sinensis-consensus-2018.LG055_371229025_37122902marker_locus57.55 cM
Citrus-C.sinensis-consensus-2018.LG055_372775815_37277581marker_locus59.54 cM
Citrus-C.sinensis-consensus-2018.LG055_374383395_37438339marker_locus59.61 cM
Citrus-C.sinensis-consensus-2018.LG055_379106595_37910659marker_locus60.57 cM
Citrus-C.sinensis-consensus-2018.LG055_376268675_37626867marker_locus61.04 cM
Citrus-C.sinensis-consensus-2018.LG055_380932505_38093250marker_locus61.88 cM
Citrus-C.sinensis-consensus-2018.LG055_383764075_38376407marker_locus63.38 cM
Citrus-C.sinensis-consensus-2018.LG055_386725405_38672540marker_locus64.98 cM
Citrus-C.sinensis-consensus-2018.LG055_393235415_39323541marker_locus65.82 cM
Citrus-C.sinensis-consensus-2018.LG055_395847105_39584710marker_locus66.67 cM
Citrus-C.sinensis-consensus-2018.LG055_397177945_39717794marker_locus68.12 cM
Citrus-C.sinensis-consensus-2018.LG055_398595005_39859500marker_locus69.27 cM
Citrus-C.sinensis-consensus-2018.LG055_400102575_40010257marker_locus71.35 cM
Citrus-C.sinensis-consensus-2018.LG055_402169305_40216930marker_locus72.06 cM
Citrus-C.sinensis-consensus-2018.LG055_405680645_40568064marker_locus74.61 cM
Citrus-C.sinensis-consensus-2018.LG055_407166405_40716640marker_locus75.56 cM
Citrus-C.sinensis-consensus-2018.LG055_411352305_41135230marker_locus77.61 cM
Citrus-C.sinensis-consensus-2018.LG055_409826335_40982633marker_locus77.91 cM
Citrus-C.sinensis-consensus-2018.LG055_413412525_41341252marker_locus78.34 cM
Citrus-C.sinensis-consensus-2018.LG055_416091005_41609100marker_locus78.38 cM
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Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Comments:mapping population
Population size:170
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
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