Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG066_239545126_23954512marker_locus59.79 cM
Citrus-C.sinensis-consensus-2018.LG066_243576616_24357661marker_locus61.92 cM
Citrus-C.sinensis-consensus-2018.LG066_246464266_24646426marker_locus62.18 cM
Citrus-C.sinensis-consensus-2018.LG066_244172636_24417263marker_locus62.63 cM
Citrus-C.sinensis-consensus-2018.LG066_248269486_24826948marker_locus63.11 cM
Citrus-C.sinensis-consensus-2018.LG066_251231686_25123168marker_locus64.56 cM
Citrus-C.sinensis-consensus-2018.LG066_254440286_25444028marker_locus66.59 cM
Citrus-C.sinensis-consensus-2018.LG066_252382156_25238215marker_locus68.2 cM
Citrus-C.sinensis-consensus-2018.LG077_2656827_265682marker_locus0 cM
Citrus-C.sinensis-consensus-2018.LG077_1660747_166074marker_locus0.67 cM
Citrus-C.sinensis-consensus-2018.LG077_6930997_693099marker_locus2.19 cM
Citrus-C.sinensis-consensus-2018.LG077_8924447_892444marker_locus2.56 cM
Citrus-C.sinensis-consensus-2018.LG077_12158617_1215861marker_locus3.04 cM
Citrus-C.sinensis-consensus-2018.LG077_14141857_1414185marker_locus3.68 cM
Citrus-C.sinensis-consensus-2018.LG077_17224117_1722411marker_locus5.33 cM
Citrus-C.sinensis-consensus-2018.LG077_21328517_2132851marker_locus6.9 cM
Citrus-C.sinensis-consensus-2018.LG077_23910067_2391006marker_locus7.71 cM
Citrus-C.sinensis-consensus-2018.LG077_26081697_2608169marker_locus9.37 cM
Citrus-C.sinensis-consensus-2018.LG077_25882257_2588225marker_locus9.57 cM
Citrus-C.sinensis-consensus-2018.LG077_28599717_2859971marker_locus10.87 cM
Citrus-C.sinensis-consensus-2018.LG077_32073727_3207372marker_locus11.88 cM
Citrus-C.sinensis-consensus-2018.LG077_34815597_3481559marker_locus15.24 cM
Citrus-C.sinensis-consensus-2018.LG077_38630267_3863026marker_locus16.74 cM
Citrus-C.sinensis-consensus-2018.LG077_41897347_4189734marker_locus19.74 cM
Citrus-C.sinensis-consensus-2018.LG077_43711217_4371121marker_locus21.38 cM
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Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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