Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG077_48059227_4805922marker_locus22.48 cM
Citrus-C.sinensis-consensus-2018.LG077_46148027_4614802marker_locus22.81 cM
Citrus-C.sinensis-consensus-2018.LG077_50363387_5036338marker_locus23.15 cM
Citrus-C.sinensis-consensus-2018.LG077_45136227_4513622marker_locus23.6 cM
Citrus-C.sinensis-consensus-2018.LG077_52243397_5224339marker_locus27.49 cM
Citrus-C.sinensis-consensus-2018.LG077_54392677_5439267marker_locus29.54 cM
Citrus-C.sinensis-consensus-2018.LG077_57616787_5761678marker_locus30.62 cM
Citrus-C.sinensis-consensus-2018.LG077_58994747_5899474marker_locus33.97 cM
Citrus-C.sinensis-consensus-2018.LG077_61152447_6115244marker_locus34.79 cM
Citrus-C.sinensis-consensus-2018.LG077_63470457_6347045marker_locus37.25 cM
Citrus-C.sinensis-consensus-2018.LG077_65522277_6552227marker_locus37.64 cM
Citrus-C.sinensis-consensus-2018.LG077_66497147_6649714marker_locus38.99 cM
Citrus-C.sinensis-consensus-2018.LG077_69437997_6943799marker_locus39.08 cM
Citrus-C.sinensis-consensus-2018.LG077_71703707_7170370marker_locus39.77 cM
Citrus-C.sinensis-consensus-2018.LG077_72544227_7254422marker_locus41.82 cM
Citrus-C.sinensis-consensus-2018.LG077_76808577_7680857marker_locus42.66 cM
Citrus-C.sinensis-consensus-2018.LG077_79478197_7947819marker_locus43.86 cM
Citrus-C.sinensis-consensus-2018.LG077_84890297_8489029marker_locus46.31 cM
Citrus-C.sinensis-consensus-2018.LG077_87575557_8757555marker_locus46.85 cM
Citrus-C.sinensis-consensus-2018.LG077_99375117_9937511marker_locus49.69 cM
Citrus-C.sinensis-consensus-2018.LG077_90392737_9039273marker_locus50.66 cM
Citrus-C.sinensis-consensus-2018.LG077_94657727_9465772marker_locus50.78 cM
Citrus-C.sinensis-consensus-2018.LG077_101377087_10137708marker_locus52.72 cM
Citrus-C.sinensis-consensus-2018.LG077_108258407_10825840marker_locus53.59 cM
Citrus-C.sinensis-consensus-2018.LG077_107583717_10758371marker_locus54.07 cM
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Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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