Citrus-C.sinensis-consensus-2018

Map Overview

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NameCitrus-C.sinensis-consensus-2018
SpeciesCitrus sinensis
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci754
Number of QTL4
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 754 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-C.sinensis-consensus-2018.LG022_280468932_28046893marker_locus42.44 cM
Citrus-C.sinensis-consensus-2018.LG022_295815552_29581555marker_locus43.82 cM
Citrus-C.sinensis-consensus-2018.LG022_298093992_29809399marker_locus46.3 cM
Citrus-C.sinensis-consensus-2018.LG022_304803192_30480319marker_locus50.44 cM
Citrus-C.sinensis-consensus-2018.LG022_301626592_30162659marker_locus51.33 cM
Citrus-C.sinensis-consensus-2018.LG022_309567762_30956776marker_locus57.44 cM
Citrus-C.sinensis-consensus-2018.LG022_313460632_31346063marker_locus57.74 cM
Citrus-C.sinensis-consensus-2018.LG022_314322572_31432257marker_locus59.37 cM
Citrus-C.sinensis-consensus-2018.LG022_320016592_32001659marker_locus64.28 cM
Citrus-C.sinensis-consensus-2018.LG022_324376672_32437667marker_locus64.54 cM
Citrus-C.sinensis-consensus-2018.LG022_326821602_32682160marker_locus67.39 cM
Citrus-C.sinensis-consensus-2018.LG022_330260922_33026092marker_locus71.59 cM
Citrus-C.sinensis-consensus-2018.LG022_332921522_33292152marker_locus76.82 cM
Citrus-C.sinensis-consensus-2018.LG022_336093122_33609312marker_locus79.8 cM
Citrus-C.sinensis-consensus-2018.LG022_339607592_33960759marker_locus82.29 cM
Citrus-C.sinensis-consensus-2018.LG022_340758762_34075876marker_locus83.02 cM
Citrus-C.sinensis-consensus-2018.LG022_345309042_34530904marker_locus85.33 cM
Citrus-C.sinensis-consensus-2018.LG022_347974262_34797426marker_locus89.6 cM
Citrus-C.sinensis-consensus-2018.LG022_353035222_35303522marker_locus94.6 cM
Citrus-C.sinensis-consensus-2018.LG022_354858092_35485809marker_locus94.67 cM
Citrus-C.sinensis-consensus-2018.LG022_362629012_36262901marker_locus99.56 cM
Citrus-C.sinensis-consensus-2018.LG033_1230163_123016marker_locus0 cM
Citrus-C.sinensis-consensus-2018.LG033_2923803_292380marker_locus1.38 cM
Citrus-C.sinensis-consensus-2018.LG033_5872003_587200marker_locus2.86 cM
Citrus-C.sinensis-consensus-2018.LG033_6841843_684184marker_locus3.06 cM
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Map QTL
This map contains 4 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016QTL--43.9 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015QTL--56.3 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2015.2QTL--67.1 cM
Citrus-C.sinensis-consensus-2018.LG07qHLBFS.C.sinensis-consensus.LG7.2016.2QTL--73.5 cM
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