Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG044_203346234_20334623marker_locus76.27 cM
Citrus-P.trifoliata-consensus-2018.LG044_206198044_20619804marker_locus77.29 cM
Citrus-P.trifoliata-consensus-2018.LG044_208789314_20878931marker_locus78.71 cM
Citrus-P.trifoliata-consensus-2018.LG044_212439734_21243973marker_locus80.36 cM
Citrus-P.trifoliata-consensus-2018.LG044_214730084_21473008marker_locus82.89 cM
Citrus-P.trifoliata-consensus-2018.LG044_217322554_21732255marker_locus84.44 cM
Citrus-P.trifoliata-consensus-2018.LG044_219559214_21955921marker_locus86.48 cM
Citrus-P.trifoliata-consensus-2018.LG044_221202414_22120241marker_locus87.69 cM
Citrus-P.trifoliata-consensus-2018.LG044_225145794_22514579marker_locus89.85 cM
Citrus-P.trifoliata-consensus-2018.LG044_223008024_22300802marker_locus90.54 cM
Citrus-P.trifoliata-consensus-2018.LG044_228238334_22823833marker_locus93.33 cM
Citrus-P.trifoliata-consensus-2018.LG044_226364774_22636477marker_locus94.09 cM
Citrus-P.trifoliata-consensus-2018.LG044_232674414_23267441marker_locus100.03 cM
Citrus-P.trifoliata-consensus-2018.LG044_235464334_23546433marker_locus100.89 cM
Citrus-P.trifoliata-consensus-2018.LG044_237129704_23712970marker_locus103.11 cM
Citrus-P.trifoliata-consensus-2018.LG044_238597214_23859721marker_locus106.18 cM
Citrus-P.trifoliata-consensus-2018.LG044_240931634_24093163marker_locus109.11 cM
Citrus-P.trifoliata-consensus-2018.LG044_242956844_24295684marker_locus111.93 cM
Citrus-P.trifoliata-consensus-2018.LG044_246878334_24687833marker_locus114.5 cM
Citrus-P.trifoliata-consensus-2018.LG044_254115794_25411579marker_locus119.42 cM
Citrus-P.trifoliata-consensus-2018.LG044_252183614_25218361marker_locus121.53 cM
Citrus-P.trifoliata-consensus-2018.LG055_818135_81813marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG055_8087845_808784marker_locus1.55 cM
Citrus-P.trifoliata-consensus-2018.LG055_3740685_374068marker_locus2.74 cM
Citrus-P.trifoliata-consensus-2018.LG055_23215385_2321538marker_locus3.72 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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