Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG055_5166385_516638marker_locus4.55 cM
Citrus-P.trifoliata-consensus-2018.LG055_11488745_1148874marker_locus5.12 cM
Citrus-P.trifoliata-consensus-2018.LG055_13418095_1341809marker_locus6.02 cM
Citrus-P.trifoliata-consensus-2018.LG055_43142215_4314221marker_locus11.97 cM
Citrus-P.trifoliata-consensus-2018.LG055_52886805_5288680marker_locus14.17 cM
Citrus-P.trifoliata-consensus-2018.LG055_50813605_5081360marker_locus16.03 cM
Citrus-P.trifoliata-consensus-2018.LG055_34153275_3415327marker_locus17.13 cM
Citrus-P.trifoliata-consensus-2018.LG055_98743875_9874387marker_locus19.98 cM
Citrus-P.trifoliata-consensus-2018.LG055_192413215_19241321marker_locus25.25 cM
Citrus-P.trifoliata-consensus-2018.LG055_205882315_20588231marker_locus26.68 cM
Citrus-P.trifoliata-consensus-2018.LG055_215229185_21522918marker_locus27.17 cM
Citrus-P.trifoliata-consensus-2018.LG055_201404245_20140424marker_locus27.81 cM
Citrus-P.trifoliata-consensus-2018.LG055_208826665_20882666marker_locus28.24 cM
Citrus-P.trifoliata-consensus-2018.LG055_260006065_26000606marker_locus32.7 cM
Citrus-P.trifoliata-consensus-2018.LG055_269926625_26992662marker_locus33.5 cM
Citrus-P.trifoliata-consensus-2018.LG055_274373675_27437367marker_locus34.67 cM
Citrus-P.trifoliata-consensus-2018.LG055_301822555_30182255marker_locus38.24 cM
Citrus-P.trifoliata-consensus-2018.LG055_278152445_27815244marker_locus38.97 cM
Citrus-P.trifoliata-consensus-2018.LG055_303121735_30312173marker_locus39.91 cM
Citrus-P.trifoliata-consensus-2018.LG055_298683995_29868399marker_locus40.97 cM
Citrus-P.trifoliata-consensus-2018.LG055_296596685_29659668marker_locus41.33 cM
Citrus-P.trifoliata-consensus-2018.LG055_294758435_29475843marker_locus41.79 cM
Citrus-P.trifoliata-consensus-2018.LG055_324797025_32479702marker_locus43.61 cM
Citrus-P.trifoliata-consensus-2018.LG055_306285135_30628513marker_locus44.09 cM
Citrus-P.trifoliata-consensus-2018.LG055_308751135_30875113marker_locus45.31 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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