Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG011_235625121_23562512marker_locus76.18 cM
Citrus-P.trifoliata-consensus-2018.LG011_243020511_24302051marker_locus79.75 cM
Citrus-P.trifoliata-consensus-2018.LG011_240523641_24052364marker_locus81.19 cM
Citrus-P.trifoliata-consensus-2018.LG011_247882311_24788231marker_locus84.58 cM
Citrus-P.trifoliata-consensus-2018.LG011_251308951_25130895marker_locus85.64 cM
Citrus-P.trifoliata-consensus-2018.LG011_259612391_25961239marker_locus94.89 cM
Citrus-P.trifoliata-consensus-2018.LG011_257952471_25795247marker_locus96.18 cM
Citrus-P.trifoliata-consensus-2018.LG011_263659401_26365940marker_locus98.42 cM
Citrus-P.trifoliata-consensus-2018.LG011_266008561_26600856marker_locus101.14 cM
Citrus-P.trifoliata-consensus-2018.LG011_268494481_26849448marker_locus103.81 cM
Citrus-P.trifoliata-consensus-2018.LG011_271618391_27161839marker_locus107.47 cM
Citrus-P.trifoliata-consensus-2018.LG011_273016781_27301678marker_locus110.16 cM
Citrus-P.trifoliata-consensus-2018.LG011_277053491_27705349marker_locus111.07 cM
Citrus-P.trifoliata-consensus-2018.LG011_275588571_27558857marker_locus112.02 cM
Citrus-P.trifoliata-consensus-2018.LG011_278946661_27894666marker_locus112.79 cM
Citrus-P.trifoliata-consensus-2018.LG011_281101251_28110125marker_locus114.45 cM
Citrus-P.trifoliata-consensus-2018.LG011_282730331_28273033marker_locus114.91 cM
Citrus-P.trifoliata-consensus-2018.LG011_284109091_28410909marker_locus116.09 cM
Citrus-P.trifoliata-consensus-2018.LG011_287892481_28789248marker_locus117.21 cM
Citrus-P.trifoliata-consensus-2018.LG011_288595961_28859596marker_locus117.94 cM
Citrus-P.trifoliata-consensus-2018.LG022_2612182_261218marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG022_4568942_456894marker_locus0.92 cM
Citrus-P.trifoliata-consensus-2018.LG022_48147962_4814796marker_locus3.9 cM
Citrus-P.trifoliata-consensus-2018.LG022_51201262_5120126marker_locus6.99 cM
Citrus-P.trifoliata-consensus-2018.LG022_63344642_6334464marker_locus9.34 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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