Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG022_64728952_6472895marker_locus9.94 cM
Citrus-P.trifoliata-consensus-2018.LG022_68712242_6871224marker_locus10.96 cM
Citrus-P.trifoliata-consensus-2018.LG022_71971252_7197125marker_locus14.59 cM
Citrus-P.trifoliata-consensus-2018.LG022_74305972_7430597marker_locus15.77 cM
Citrus-P.trifoliata-consensus-2018.LG022_73441352_7344135marker_locus16.34 cM
Citrus-P.trifoliata-consensus-2018.LG022_81443372_8144337marker_locus18.76 cM
Citrus-P.trifoliata-consensus-2018.LG022_85546862_8554686marker_locus22.52 cM
Citrus-P.trifoliata-consensus-2018.LG022_86669472_8666947marker_locus23 cM
Citrus-P.trifoliata-consensus-2018.LG022_88899182_8889918marker_locus23.34 cM
Citrus-P.trifoliata-consensus-2018.LG022_83815952_8381595marker_locus23.56 cM
Citrus-P.trifoliata-consensus-2018.LG022_96061632_9606163marker_locus28.83 cM
Citrus-P.trifoliata-consensus-2018.LG022_93565032_9356503marker_locus29.64 cM
Citrus-P.trifoliata-consensus-2018.LG022_99827082_9982708marker_locus31.74 cM
Citrus-P.trifoliata-consensus-2018.LG022_104497492_10449749marker_locus32.62 cM
Citrus-P.trifoliata-consensus-2018.LG022_107469642_10746964marker_locus33.8 cM
Citrus-P.trifoliata-consensus-2018.LG022_102735072_10273507marker_locus34.81 cM
Citrus-P.trifoliata-consensus-2018.LG022_115206702_11520670marker_locus35.94 cM
Citrus-P.trifoliata-consensus-2018.LG022_110869112_11086911marker_locus36.81 cM
Citrus-P.trifoliata-consensus-2018.LG022_132520192_13252019marker_locus37.3 cM
Citrus-P.trifoliata-consensus-2018.LG022_120478412_12047841marker_locus38.73 cM
Citrus-P.trifoliata-consensus-2018.LG022_128943392_12894339marker_locus39.16 cM
Citrus-P.trifoliata-consensus-2018.LG022_134644982_13464498marker_locus39.49 cM
Citrus-P.trifoliata-consensus-2018.LG022_119444162_11944416marker_locus39.63 cM
Citrus-P.trifoliata-consensus-2018.LG022_125316872_12531687marker_locus39.82 cM
Citrus-P.trifoliata-consensus-2018.LG022_123887822_12388782marker_locus39.94 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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