Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG022_140143352_14014335marker_locus40.17 cM
Citrus-P.trifoliata-consensus-2018.LG022_139621232_13962123marker_locus41.06 cM
Citrus-P.trifoliata-consensus-2018.LG022_142186712_14218671marker_locus41.87 cM
Citrus-P.trifoliata-consensus-2018.LG022_146621592_14662159marker_locus42.26 cM
Citrus-P.trifoliata-consensus-2018.LG022_166300722_16630072marker_locus43.16 cM
Citrus-P.trifoliata-consensus-2018.LG022_154815892_15481589marker_locus43.5 cM
Citrus-P.trifoliata-consensus-2018.LG022_168159242_16815924marker_locus43.96 cM
Citrus-P.trifoliata-consensus-2018.LG022_158350182_15835018marker_locus44.59 cM
Citrus-P.trifoliata-consensus-2018.LG022_212776782_21277678marker_locus45.45 cM
Citrus-P.trifoliata-consensus-2018.LG022_220107982_22010798marker_locus47.45 cM
Citrus-P.trifoliata-consensus-2018.LG022_222107142_22210714marker_locus48.21 cM
Citrus-P.trifoliata-consensus-2018.LG022_214035172_21403517marker_locus49.61 cM
Citrus-P.trifoliata-consensus-2018.LG022_226069272_22606927marker_locus51.22 cM
Citrus-P.trifoliata-consensus-2018.LG022_224746732_22474673marker_locus51.82 cM
Citrus-P.trifoliata-consensus-2018.LG022_230146002_23014600marker_locus53.3 cM
Citrus-P.trifoliata-consensus-2018.LG022_233140162_23314016marker_locus54.08 cM
Citrus-P.trifoliata-consensus-2018.LG022_238969282_23896928marker_locus55.03 cM
Citrus-P.trifoliata-consensus-2018.LG022_246302452_24630245marker_locus59.75 cM
Citrus-P.trifoliata-consensus-2018.LG022_257062292_25706229marker_locus61.85 cM
Citrus-P.trifoliata-consensus-2018.LG022_259847312_25984731marker_locus63.06 cM
Citrus-P.trifoliata-consensus-2018.LG022_261874012_26187401marker_locus63.55 cM
Citrus-P.trifoliata-consensus-2018.LG022_262656972_26265697marker_locus63.95 cM
Citrus-P.trifoliata-consensus-2018.LG022_264377032_26437703marker_locus65.86 cM
Citrus-P.trifoliata-consensus-2018.LG022_267041352_26704135marker_locus68.84 cM
Citrus-P.trifoliata-consensus-2018.LG022_268101682_26810168marker_locus69.41 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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