Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG022_351816562_35181656marker_locus117.54 cM
Citrus-P.trifoliata-consensus-2018.LG022_352747392_35274739marker_locus118.53 cM
Citrus-P.trifoliata-consensus-2018.LG022_354712392_35471239marker_locus119.14 cM
Citrus-P.trifoliata-consensus-2018.LG022_357997592_35799759marker_locus120.91 cM
Citrus-P.trifoliata-consensus-2018.LG022_362701172_36270117marker_locus121.93 cM
Citrus-P.trifoliata-consensus-2018.LG022_360231662_36023166marker_locus122.84 cM
Citrus-P.trifoliata-consensus-2018.LG022_359719022_35971902marker_locus124.48 cM
Citrus-P.trifoliata-consensus-2018.LG033_5354143_535414marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG033_6633613_663361marker_locus0.4 cM
Citrus-P.trifoliata-consensus-2018.LG033_3487263_348726marker_locus1.03 cM
Citrus-P.trifoliata-consensus-2018.LG033_9094433_909443marker_locus2.91 cM
Citrus-P.trifoliata-consensus-2018.LG033_11610743_1161074marker_locus5.57 cM
Citrus-P.trifoliata-consensus-2018.LG033_12453733_1245373marker_locus6.29 cM
Citrus-P.trifoliata-consensus-2018.LG033_16106553_1610655marker_locus7.79 cM
Citrus-P.trifoliata-consensus-2018.LG033_18498793_1849879marker_locus9.05 cM
Citrus-P.trifoliata-consensus-2018.LG033_25155043_2515504marker_locus13.95 cM
Citrus-P.trifoliata-consensus-2018.LG033_23954903_2395490marker_locus14.11 cM
Citrus-P.trifoliata-consensus-2018.LG033_28899433_2889943marker_locus17.41 cM
Citrus-P.trifoliata-consensus-2018.LG033_30530033_3053003marker_locus18.44 cM
Citrus-P.trifoliata-consensus-2018.LG033_32148303_3214830marker_locus19.24 cM
Citrus-P.trifoliata-consensus-2018.LG033_40118653_4011865marker_locus23.01 cM
Citrus-P.trifoliata-consensus-2018.LG033_35523203_3552320marker_locus24.01 cM
Citrus-P.trifoliata-consensus-2018.LG033_39173723_3917372marker_locus24.71 cM
Citrus-P.trifoliata-consensus-2018.LG033_43901763_4390176marker_locus26.25 cM
Citrus-P.trifoliata-consensus-2018.LG033_45986363_4598636marker_locus27.67 cM
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Map QTL
This map contains 14 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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