Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG033_46161393_4616139marker_locus28.49 cM
Citrus-P.trifoliata-consensus-2018.LG033_48281743_4828174marker_locus30.96 cM
Citrus-P.trifoliata-consensus-2018.LG033_56586073_5658607marker_locus31.8 cM
Citrus-P.trifoliata-consensus-2018.LG033_59484103_5948410marker_locus32.86 cM
Citrus-P.trifoliata-consensus-2018.LG033_53718233_5371823marker_locus33.19 cM
Citrus-P.trifoliata-consensus-2018.LG033_63300593_6330059marker_locus34.64 cM
Citrus-P.trifoliata-consensus-2018.LG033_65672093_6567209marker_locus35.36 cM
Citrus-P.trifoliata-consensus-2018.LG033_66958973_6695897marker_locus36.72 cM
Citrus-P.trifoliata-consensus-2018.LG033_68374933_6837493marker_locus37.39 cM
Citrus-P.trifoliata-consensus-2018.LG033_70139453_7013945marker_locus37.77 cM
Citrus-P.trifoliata-consensus-2018.LG033_73915523_7391552marker_locus39.43 cM
Citrus-P.trifoliata-consensus-2018.LG033_77399863_7739986marker_locus41.95 cM
Citrus-P.trifoliata-consensus-2018.LG033_78992903_7899290marker_locus42.93 cM
Citrus-P.trifoliata-consensus-2018.LG033_84951603_8495160marker_locus43.31 cM
Citrus-P.trifoliata-consensus-2018.LG033_81963623_8196362marker_locus43.95 cM
Citrus-P.trifoliata-consensus-2018.LG033_83836803_8383680marker_locus44.94 cM
Citrus-P.trifoliata-consensus-2018.LG033_86481133_8648113marker_locus46.4 cM
Citrus-P.trifoliata-consensus-2018.LG033_89176023_8917602marker_locus47.46 cM
Citrus-P.trifoliata-consensus-2018.LG033_91057393_9105739marker_locus49.29 cM
Citrus-P.trifoliata-consensus-2018.LG033_109164983_10916498marker_locus53.17 cM
Citrus-P.trifoliata-consensus-2018.LG033_162984493_16298449marker_locus54.8 cM
Citrus-P.trifoliata-consensus-2018.LG033_102520843_10252084marker_locus55.34 cM
Citrus-P.trifoliata-consensus-2018.LG033_140735513_14073551marker_locus55.85 cM
Citrus-P.trifoliata-consensus-2018.LG033_114070643_11407064marker_locus56.36 cM
Citrus-P.trifoliata-consensus-2018.LG033_159946563_15994656marker_locus56.96 cM
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Map QTL
This map contains 14 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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