DY306883

Overview
NameDY306883
Unique NameDY306883
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1188
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY306883 vs. ExPASy Swiss-Prot
Match: Y3453_DICDI (Uncharacterized protein DDB_G0273453/DDB_G0273565 OS=Dictyostelium discoideum GN=DDB_G0273453 PE=4 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.809e-53
Identity = 107/258 (41.47%), Postives = 161/258 (62.40%), Query Frame = 2 
Query:    2 MRSFVDEKQNPLLWASTYHAGEFLDPDAVAEAKAKKHARKLAGAALSVPKDEASNSSATGKSDIRPEVGSSAAELISPKQMAIEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINNTNVDKSVAAIHATVFSCLRRR-EGGEQLYDPTTNTVTVIAEEYRNQCAAHSLSSQGMFQLIQRK 772
            +R F+  +++P+LWASTYHAGE +                             SN S                  +S K+  ++G++AQ+EM+ + LD LI  +E+R ES++VEGVHL    ++ L+KKHPS IPF++YI+NE KH ERFA+R+KYMTLDP +NKY KY +NIR I D+LC  AD+H++P+I+NT++D+S+A IH T+F+CL+R+ + GE  Y+  T+ + ++  +Y  Q      SS+GM +LIQ+K
Sbjct:  293 LRKFISRQESPILWASTYHAGEII-----------------------------SNPS------------------LSHKEKILQGYEAQNEMIFNKLDILIGHYEKRKESLIVEGVHLDTKLILRLVKKHPSCIPFLMYISNEAKHKERFAIRSKYMTLDPHQNKYTKYFKNIRIINDHLCHGADEHMIPQIDNTSIDRSLATIHGTIFACLKRKVQCGESYYNHETDKMNMLYNQY-EQIQHQFWSSKGMLRLIQKK 502
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BLAST of DY306883 vs. ExPASy Swiss-Prot
Match: PGK2_METKA (2-phosphoglycerate kinase OS=Methanopyrus kandleri GN=pgk2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.290e-14
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 2 
Query:  248 IEGFKAQSEMVIDSLDRLITAWEERNESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCQRADKHLVPKINNTNVDKSVAAIHATVFSCLRRRE 649
            I GF   SE V+  ++ ++         V+VEGVH+    +   +  +P++  FM+ + +E+ H  RF  R++   L     +Y+KY   IR I D+L + A++H +P INN ++D++V  I + + S L + E
Sbjct:  184 ITGFLDHSEPVVVGIEGVVNRSINEGIHVIVEGVHIVPRLIKKEILNYPNVFVFMLAVEDEEAHKWRFYARSRDTKLSRPAERYLKYFEEIRRIHDFLVEDAEEHDIPVINNEHIDETVDQIVSYISSKLLKGE 317
The following BLAST results are available for this feature:
BLAST of DY306883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3453_DICDI1.809e-5341.47Uncharacterized protein DDB_G0273453/DDB_G0273565 ... [more]
PGK2_METKA6.290e-1430.602-phosphoglycerate kinase OS=Methanopyrus kandleri... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI1DD10FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306883 ID=DY306883; Name=DY306883; organism=Citrus clementina; type=EST; length=1188bp
GATGAGGAGTTTTGTTGATGAGAAACAAAACCCTCTACTCTGGGCTTCAA
CCTACCATGCAGGGGAGTTCTTGGACCCTGACGCAGTTGCAGAAGCAAAG
GCTAAAAAGCACGCCAGAAAATTGGCAGGTGCTGCACTTTCAGTTCCAAA
GGATGAAGCATCCAATAGTTCAGCAACTGGGAAATCCGATATCCGTCCAG
AGGTTGGTTCCAGTGCAGCTGAATTGATTAGTCCAAAGCAGATGGCTATT
GAAGGATTTAAGGCTCAAAGTGAGATGGTCATTGACAGCCTAGATCGACT
GATTACTGCATGGGAAGAAAGGAATGAATCAGTTGTTGTTGAGGGTGTTC
ATTTAAGCCTGAATTTTGTGATGGGGCTTATGAAGAAACACCCATCAATC
ATACCTTTCATGATATACATCACAAATGAAGATAAACACATGGAACGATT
TGCAGTCCGCGCAAAGTACATGACACTAGACCCAGCCAAAAATAAATATG
TCAAGTATATTCGAAATATTAGAACTATACAGGATTATCTCTGTCAGCGG
GCTGACAAGCATCTGGTCCCCAAAATAAACAATACTAATGTTGACAAGAG
TGTAGCAGCCATCCATGCAACGGTCTTCAGCTGCCTTCGCAGGCGTGAAG
GAGGAGAGCAGCTTTATGATCCAACCACTAATACAGTCACTGTGATTGCT
GAGGAGTATAGGAACCAGTGTGCAGCACATTCCTTGAGCTCCCAGGGGAT
GTTTCAACTGATCCAGAGAAAGGTTCTTCTAGGCATCTGATGGCTCTTCT
TATACTGATGGATCGGTCGCCCAGGCTTTGCCTGTTACGTCAGTGGACAG
TAATGGTAAGCCTATACTGGTCACTGGGACTGAGGAGAGAATGGGGAATC
TAATGTATGGGCCTTAAAGATTGGAAAAGGAGAATCGGTTAATCTTCAGT
TTGCCCCTTTGGGATTAGTGCTGGGATTATGGACGGTTGCCCAATTCCTG
GCCGAATGGGGGAAGAATCCAGGGCCCAAACTGGATTGGGGAAAAAAAAA
CCCCCCCTTCTTGCTGGTACCCCCCCCAGGGAGGCCAAAGGAAATTTCCC
AGGACCCCAAGGAAGAAACACTCCCCCCCCCCGGGGCGGGAATAAAAAAA
AGGTTTTAAAACCCCCCCTTTGTGGGCGGTGAAAACCC
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