DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9297 contig Ccv1_Contig9297:1..1222. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 5.968e-100
Identity = 183/210 (87.14%), Postives = 195/210 (92.86%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQGG 632
            AA+ +K NLFSNLIRHPKFISDT +AIADAY+ TDSEFLKSEN+QNRDAGSTASTAI VGDRLLVAN GDSRAVICRGGNAIAVSRDHKPDQ+DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE +DSSLEFLILASDGLWDVV+NEEAV MIK I+DPEE AKRLM EAYQRGSADN+TCVVV   ++Q G
Sbjct:   76 AAEYVKQNLFSNLIRHPKFISDTTAAIADAYNQTDSEFLKSENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKAIEDPEEGAKRLMMEAYQRGSADNITCVVVRFFSDQAG 285          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 9.860e-95
Identity = 172/214 (80.37%), Postives = 196/214 (91.59%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVL---ANQGGP 635
            AA+ +K +LFSNLI+HPKFISD KSAIA+ Y+HTDSEFLK+E++  RDAGSTASTAI VGDRLLVAN GDSRAV+CRGG+AIAVSRDHKPDQ+DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD+LLKQYVVADPEI+EE++DSSLEFLILASDGLWDVV+N+EAV M++PIQDPE+AAKRL+QEAYQRGSADN+T V+V  L      GGP
Sbjct:  125 AAEYVKQHLFSNLIKHPKFISDIKSAIAETYNHTDSEFLKAESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSADNITVVIVRFLEGTTTGGGP 338          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.859e-93
Identity = 171/212 (80.66%), Postives = 191/212 (90.09%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQGGPP 638
            AA+ +K NLF+NLI+HPK  SDTKSAIA+ Y+ TDSE LK+E + NRDAGSTASTAI VGDRLLVAN GDSRAVICRGG+AIAVSRDHKPDQ+DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD+LLKQYVVADPEI+EEV+DSSLEFLILASDGLWDVVTNEEAVAM+KPI D E+AAK+L+QEA QRGSADN+TC+VV  L  +   P
Sbjct:  107 AAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLLQEASQRGSADNITCLVVRFLEQENHLP 318          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 2.056e-92
Identity = 169/208 (81.25%), Postives = 189/208 (90.87%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQ 626
            AA+ +K +LFSNLI HPKFISDTKSAIADAY+HTDSE LKSEN+  RDAGSTASTAI VGDRLLVAN GDSRAVICRGGNA AVSRDHKPDQ+DER+RIE+AGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE ID SLEFLILASDGLWDV +NEEAVA++K ++DPEE+ K+L+ EA +RGSADN+TCVVV  L ++
Sbjct:   76 AAEYVKRHLFSNLITHPKFISDTKSAIADAYTHTDSELLKSENSHTRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSADNITCVVVRFLESK 283          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 2.513e-90
Identity = 166/205 (80.98%), Postives = 186/205 (90.73%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVL 617
            AA+ +K +LFSNLI HPKFISDTKSAI DAY+HTDSE LKSEN+ NRDAGSTASTAI VGDRL+VAN GDSRAVI RGG AIAVSRDHKPDQ+DER+RIE+AGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE ID +LEFLILASDGLWDV +NE AVAM+K ++DPE++AK+L+ EA +RGSADN+TCVVV  L
Sbjct:   76 AAEYVKRHLFSNLITHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVKEVEDPEDSAKKLVGEAIKRGSADNITCVVVRFL 280          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 9.550e-90
Identity = 166/208 (79.81%), Postives = 186/208 (89.42%), Query Frame = 3
Query:    6 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQG 629
            A+ +K NLFS+L+RHPKFISDTK AI DAY  TDSEFL+S+++QN+  GSTASTA+ VGDRL VAN GDSRA+ICRGGNAIAVS+DHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD+LLKQYVV DPEI+EEVID SLEFLILASDGLWDVVTNEEAV M + I DPEEAAK+L+QEAY+R S+DN+TCVVV  L  QG
Sbjct:   71 AEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQ-CGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVRFLHGQG 277          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.346e-74
Identity = 134/202 (66.34%), Postives = 171/202 (84.65%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA+ LK +LF NL++HP+F+++TK AI++ Y  TDSEFL SE++ +RD GSTASTA+ VG+ L VAN GDSRAVI + G AIA+S DHKP+++DER+RIE AGG VMWAGTWRVGGVLA+SRAFG+RLLKQ+VVADPEIQE+ ID  LEFLILASDGLWDVV NE+AV+++K  ++PE AA++L + A+ RGS DN+TC+VV
Sbjct:  272 AAEYLKEHLFENLMKHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDDGSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVKIEEEPEAAARKLTETAFSRGSGDNITCIVV 473          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 3.412e-71
Identity = 129/202 (63.86%), Postives = 167/202 (82.67%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA+ LK NLF NL++HP+F++DTK AI++ Y  TD++FL+SE+N  RD GSTASTA+ VG  L VAN GDSRAV+ + G A+A+S DHKP+++DER+RIE+AGG V+WAGTWRVGGVLA+SRAFG+RLLK +VVA+PEIQEE+++  LE L+LASDGLWDVV NEEAV++ K    PE  A++L + AY RGSADN+TC+VV
Sbjct:  154 AAEYLKENLFENLLKHPEFLTDTKLAISETYQKTDTDFLESESNAFRDDGSTASTAVLVGGHLYVANVGDSRAVVSKAGKAMALSEDHKPNRSDERKRIENAGGVVIWAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAKTEDLPESVARKLTEIAYSRGSADNITCIVV 355          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 9.928e-71
Identity = 130/205 (63.41%), Postives = 166/205 (80.98%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVL 617
            AA+ LK +LF NL++HP FI+DTKSAI++ Y  TDS+FL +E N NR+ GSTASTAI VG+ + VAN GDSR V+ + G AIA+S DHKP++ DER+RIE+AGG V W+GTWRVGGVLA+SRAFG+R LK++VVA+PE+QE+ ID  LEFLILASDGLWDVV+NE AVA +K  + PE AA++L + A+ RGS DN+TC+VV  L
Sbjct:  158 AAEHLKKHLFENLLKHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVKAEEGPEAAARKLAEIAFARGSTDNITCIVVKFL 362          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 4.927e-70
Identity = 125/201 (62.19%), Postives = 165/201 (82.09%), Query Frame = 3
Query:    6 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            A+ LK+NLF NL+ H  FISDTK AI + +  TD E+L  E  Q ++AGSTA+TA  +GD+L+VAN GDSR V  R G+A+ +S DHKPD++DERQRIEDAGGF++WAGTWRVGG+LAVSRAFGD+ LK YV+A+PEIQEE I S+LEF+++ASDGLW+V++N++AVA+++ I D E AA++L+QE Y RGS DN+TC+VV
Sbjct:  167 AEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDI-STLEFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEGYARGSCDNITCIVV 366          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C59_ARATH5.968e-10087.14Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C10_ORYSJ9.860e-9580.37Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C59_ORYSJ1.859e-9380.66Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C71_ARATH2.056e-9281.25Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C69_ARATH2.513e-9080.98Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C45_ORYSJ9.550e-9079.81Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C52_ORYSJ7.346e-7466.34Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C13_ORYSJ3.412e-7163.86Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C07_ORYSJ9.928e-7163.41Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C11_ARATH4.927e-7062.19Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
back to top