EG026586

Overview
NameEG026586
Unique NameEG026586
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length524
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12748 contig Ccv1_Contig12748:556..1079. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EG026586 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 2 
Query:    2 PGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 121
            PGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   72 PGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of EG026586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN4.652e-1172.50Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB3AF04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026586 ID=EG026586; Name=EG026586; organism=Citrus clementina; type=EST; length=524bp
CCCCGGTAGCAACCTTGCTACTAGGGGTATCGGTGCAGAGGTCTTTGACA
AGCCCACACATCCTAACTCTCCCACTGTTTATGACTGGCTTTACAGTGGG
GAGACTAGGAGCAAGCATCATCACTGAGTGGATGATACGCTCCAGCGATG
TAAATGAATGTGATGGGTCACCAACTCACCGGATGAGTTGCCTGCAGTCT
GTAGATAGTGTCGTTTCGTTTTGGATTTCGCAACGTGTCCTTGTCGTTTT
TGTTAATGCTATTTGTATTACGTGTCCTTCCTATCTAAAGTTTGGTTTTA
AATGCTGCTGACTAAAAAGTAAACCAAAGACTGTGTGATGTTTTATATCA
TATAATTGTATGTGACGTGAGGATTGCCTAAGCTTGTGGGCGGAGATGAA
AGGTTACTGGTTTTTGGGTTTAGGACATGTTTTTGATTGTCATTTTGTAA
GAGCCAAGATCATCCCTTCGTGGACGGTCGTGATGAGCATATATGTTTTA
TTATTAATAAATAAGTTGCTTCTC
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