EH406136

Overview
NameEH406136
Unique NameEH406136
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length605
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9884 contig Ccv1_Contig9884:4..608. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: MTPC2_ARATH (Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.153e-61
Identity = 112/137 (81.75%), Postives = 126/137 (91.97%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFLSLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQIDY 411
            VCLHV++DSIRSAGLILASW LSLGV+NAEVLCLG+VSV VFMLVMPLFK TGG+LLQMAPP+IPSSALSKC RQI SREDVTEV QARFWE+VPGH VGSL LQVK G+D+RP+LQ+V+ +YHDLGVQDLT+Q DY
Sbjct:  256 VCLHVISDSIRSAGLILASWLLSLGVENAEVLCLGLVSVTVFMLVMPLFKATGGVLLQMAPPNIPSSALSKCLRQITSREDVTEVLQARFWEVVPGHTVGSLRLQVKSGIDERPLLQYVYDVYHDLGVQDLTLQTDY 392          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_MOUSE (Zinc transporter 7 OS=Mus musculus GN=Slc30a7 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.050e-16
Identity = 45/138 (32.61%), Postives = 82/138 (59.42%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQIDY 411
            V LH+LAD++ S G+I ++  + + G+  A+ +C  ++++ + + V+PL + + GIL+Q  PPS+ ++ L +C++++   + V  + +  FW L     VG+L L V    D R IL   H ++   GV+ L VQID+
Sbjct:  239 VFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPSLENT-LPQCYQRVQQLQGVYNLQEQHFWTLCSDVYVGTLKLVVAPDADARWILSQTHNIFTQAGVRQLYVQIDF 375          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_RAT (Zinc transporter 7 OS=Rattus norvegicus GN=Slc30a7 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.595e-16
Identity = 45/138 (32.61%), Postives = 81/138 (58.70%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQIDY 411
            V LH+LAD++ S G+I ++  + + G+  A+ +C  ++++ + + V+PL + + GIL+Q  PPS+  + L +C++++   + V  + +  FW L     VG+L L V    D R IL   H ++   GV+ L VQID+
Sbjct:  239 VFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESIGILMQRTPPSL-ENVLPQCYQRVQQLQGVYNLQEQHFWTLCSDVYVGTLKLVVAPDADARWILSQTHNIFTQAGVRQLYVQIDF 375          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_XENTR (Zinc transporter 7 OS=Xenopus tropicalis GN=slc30a7 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16
Identity = 44/137 (32.12%), Postives = 80/137 (58.39%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 408
            V LH++AD++ S G+I+++  +   G+  A+ +C  ++++ +F+ V+PL K + GIL+Q  PPS+    L +C++++   + V  + +  FW L     +G+L L +    D R IL   H ++   GV+ L VQID
Sbjct:  251 VFLHIVADALGSVGVIISTILMQRYGLMIADPICSMLIALLIFVSVIPLLKQSIGILMQRTPPSL-DHVLPQCYQRVQQLQGVYHLQEPHFWTLCTDVYIGTLKLVIGPEADARWILSQTHNIFTQAGVRQLYVQID 386          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7B_XENLA (Zinc transporter 7-B OS=Xenopus laevis GN=slc30a7-B PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16
Identity = 44/137 (32.12%), Postives = 80/137 (58.39%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 408
            V LH++AD++ S G+I+++  +   G+  A+ +C  ++++ +F+ V+PL K + GIL+Q  PPS+    L +C++++   + V  + +  FW L     +G+L L +    D R IL   H ++   GV+ L VQID
Sbjct:  251 VFLHIVADALGSVGVIISTILMQQYGLMIADPICSMLIALLIFVSVIPLLKQSIGILMQRTPPSL-DHVLPQCYQRVQQLQGVYHLQEPHFWTLCTDVYIGTLKLVIGPEADARWILSQTHNIFTQAGVRQLYVQID 386          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_HUMAN (Zinc transporter 7 OS=Homo sapiens GN=SLC30A7 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15
Identity = 45/138 (32.61%), Postives = 81/138 (58.70%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQIDY 411
            V LH+LAD++ S G+I ++  + + G+  A+ +C  ++++ + + V+PL + + GIL+Q  PP + +S L +C++++   + V  + +  FW L     VG+L L V    D R IL   H ++   GV+ L VQID+
Sbjct:  237 VFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPLLENS-LPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQTHNIFTQAGVRQLYVQIDF 373          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7A_XENLA (Zinc transporter 7-A OS=Xenopus laevis GN=slc30a7-A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15
Identity = 43/138 (31.16%), Postives = 80/138 (57.97%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQIDY 411
            V LH++AD++ S G+I ++  +   G+  A+ +C  ++++ +F+ V+PL K + GIL+Q  PP++    L +C++++   + V  + +  FW L     +G+L L +    D R IL   H ++   GV+ L VQID+
Sbjct:  247 VFLHIVADTLGSVGVIFSTILMQRYGLMIADPICSMLIALLIFVSVIPLLKQSIGILMQRTPPAL-DHVLPQCYQRVQQLQGVYHLQEPHFWTLCTDVYIGTLKLVIGPEADARWILSQTHNIFTQAGVRQLYVQIDF 383          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_CHICK (Zinc transporter 7 OS=Gallus gallus GN=SLC30A7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.506e-15
Identity = 43/137 (31.39%), Postives = 81/137 (59.12%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 408
            V LH++AD++ S G+I+++  + + G+  A+ +C  ++++ + + ++PL K + GIL+Q  PPS+  +AL +C++++   + V  +    FW L     +G+L L V    D R IL   H ++   GV+ L +QID
Sbjct:  239 VFLHIVADTLGSIGVIISAILMQNYGLMIADPICSMLIALLIGVSIVPLLKESIGILMQRTPPSL-ENALPQCYQRVQQLQGVYSLHDPHFWTLCTDVYIGTLKLLVAPDADGRWILSQTHNIFTQAGVRQLYIQID 374          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_BOVIN (Zinc transporter 7 OS=Bos taurus GN=SLC30A7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.275e-15
Identity = 44/138 (31.88%), Postives = 81/138 (58.70%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFL-SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQIDY 411
            V LH+LAD++ S G+I ++  + + G+  A+ +C  ++++ + + V+PL + + GIL+Q  PP + ++ L +C++++   + V  + +  FW L     VG+L L V    D R IL   H ++   GV+ L VQID+
Sbjct:  237 VFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAMLIVISVIPLLRESVGILMQRTPPLLENT-LPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLVVAPDADARWILSQTHNIFTQAGVRQLYVQIDF 373          
BLAST of EH406136 vs. ExPASy Swiss-Prot
Match: ZNT7_DANRE (Zinc transporter 7 OS=Danio rerio GN=slc30a7 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14
Identity = 42/137 (30.66%), Postives = 80/137 (58.39%), Query Frame = 1
Query:    1 VCLHVLADSIRSAGLILASWFLS-LGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVKKGVDDRPILQFVHGLYHDLGVQDLTVQID 408
            V LH++AD++ S G+I+++  +    +  A+ +C  ++++ + + V+PL + + GIL+Q  PPS+   AL +C++++   + V  + +  FW L     +G+L L V    D R IL   H ++  +GV+ L VQI+
Sbjct:  248 VFLHIVADTLGSVGVIISAILMQKYDLMIADPICSMLIALLIGVSVVPLLRESIGILMQRTPPSL-DHALPECYQRVQQLQGVYNLQEPHFWTLCTDVYIGTLKLLVAPDADSRWILSQTHNIFTQVGVRQLYVQIE 383          
The following BLAST results are available for this feature:
BLAST of EH406136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MTPC2_ARATH5.153e-6181.75Metal tolerance protein C2 OS=Arabidopsis thaliana... [more]
ZNT7_MOUSE5.050e-1632.61Zinc transporter 7 OS=Mus musculus GN=Slc30a7 PE=1... [more]
ZNT7_RAT6.595e-1632.61Zinc transporter 7 OS=Rattus norvegicus GN=Slc30a7... [more]
ZNT7_XENTR8.613e-1632.12Zinc transporter 7 OS=Xenopus tropicalis GN=slc30a... [more]
ZNT7B_XENLA8.613e-1632.12Zinc transporter 7-B OS=Xenopus laevis GN=slc30a7-... [more]
ZNT7_HUMAN1.469e-1532.61Zinc transporter 7 OS=Homo sapiens GN=SLC30A7 PE=1... [more]
ZNT7A_XENLA1.469e-1531.16Zinc transporter 7-A OS=Xenopus laevis GN=slc30a7-... [more]
ZNT7_CHICK2.506e-1531.39Zinc transporter 7 OS=Gallus gallus GN=SLC30A7 PE=... [more]
ZNT7_BOVIN4.275e-1531.88Zinc transporter 7 OS=Bos taurus GN=SLC30A7 PE=2 S... [more]
ZNT7_DANRE2.122e-1430.66Zinc transporter 7 OS=Danio rerio GN=slc30a7 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1AB01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406136 ID=EH406136; Name=EH406136; organism=Citrus clementina; type=EST; length=605bp
GTTTGCTTGCATGTTCTTGCAGATTCTATTCGCAGTGCAGGTTTGATATT
GGCATCTTGGTTTTTGTCCCTTGGGGTCCAGAATGCTGAAGTTTTGTGTT
TGGGGATAGTTTCAGTTGCAGTCTTCATGCTTGTCATGCCACTATTCAAA
GTGACTGGTGGTATCTTGCTTCAGATGGCACCTCCTAGCATTCCATCTTC
AGCATTGAGTAAATGTTGGAGACAGATTGTTTCTCGGGAAGATGTTACAG
AAGTTTCCCAAGCCCGTTTTTGGGAGCTAGTGCCTGGCCATGTTGTTGGT
TCTCTCTCACTTCAGGTGAAGAAGGGAGTGGATGACCGCCCAATACTTCA
ATTTGTGCATGGTTTATACCACGATTTAGGAGTACAAGATTTGACAGTGC
AAATTGATTATGATTGAGCTTTAATCATTTGTCTTTCAGTATTTCTTGCA
ATTGACCGTTAAAGAATAGCTTTAGATTGAAGCCATTATCACTTGTAGCT
GCTGTTGTCCCTCAAGCACTTGTGTTAGTAGTAGCAAGATTTTGAATCAA
TTTCTATGTAGTTAAAGATCATTTTCAGTAATACACATACTGTAATTTAT
TCATC
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