EH406138

Overview
NameEH406138
Unique NameEH406138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9901 contig Ccv1_Contig9901:4..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23
Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 1
Query:  100 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 384
            MA +GG R+V    N+ EI +LARFAV+EHNKKQN+ L F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    1 MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  100 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 399
            MA VGGV +V A  N+ E+ +LARFAVDEHNKK+N+ L F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF P + + + T+
Sbjct:   34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 1
Query:   88 TQKTMATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 366
            T+KTM  +GGV ++    N+ EI +LARFA+ EHNK+QN  L F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   29 TEKTMM-LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19
Identity = 51/92 (55.43%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  109 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 384
            +GGV  V    N+  +V+LARFAV EHNKK NS L F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF PV  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   73 FIIRLTQKTMA--TVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSST 396
            F++      MA   +GG  +  + AN+ E   LARFAVDEHNK++N+ L F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   34 FLVGSASLAMAGHVLGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1
Query:  112 GGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSS 393
            GG+++V A  N+ ++  LARFAV+EHN+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF PV +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.497e-17
Identity = 45/75 (60.00%), Postives = 49/75 (65.33%), Query Frame = 1
Query:  151 EIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 375
            EI  LARFAVDEHNKKQN+ L F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF PV
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 1
Query:   91 QKTMATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 369
            Q+    VGGVR+++A AN+ ++ +LARFAVDEHNK +N  L +            GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:    4 QQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16
Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 1
Query:  109 VGGVREVEATANNQ-EIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVA 378
            +GGV++  A   N  E + LARFAV EHN K N+ L F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF P A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of EH406138 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1
Query:  148 QEIVNLARFAVDEHNKKQNSNLRFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 384
            +EI ++A FAV EHN+++N+ L              G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   59 KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
The following BLAST results are available for this feature:
BLAST of EH406138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN1.397e-2356.84Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH1.397e-2353.00Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT3_ARATH7.177e-2052.69Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_ORYSJ1.224e-1955.43Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT12_ORYSJ3.562e-1943.64Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT1_MAIZE6.076e-1946.81Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN1.497e-1760.00Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_ARATH4.814e-1641.94Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT1_HORVU8.212e-1647.25Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT7_ARATH1.549e-1445.57Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1AE08ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406138 ID=EH406138; Name=EH406138; organism=Citrus clementina; type=EST; length=680bp
GGTGCGTCGCCCTTGTCTCTCGCTCCATAAGGAAAGTAGAAAAACACAAC
AACTTAAAATCTTTCTCATCGCTTTATCATCAGACTTACGCAGAAAACAA
TGGCTACAGTAGGCGGTGTTCGTGAGGTTGAAGCAACAGCCAACAATCAG
GAGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAAGCA
GAATTCAAATCTGCGATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAGTGG
TTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGTCAG
AAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATTCAA
GGAGTTGAAAGAATTCAATCCTGTTGCTCAGTCTCACTCCTCAACCGCTT
AGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTGCAATGGATCAA
ACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCATGTTCAGAATAT
AAAAATAAATGTAACCGGATTTATGAGTTTGGTTCTTTAATCTTTTGCAA
GTTATGTGTCGATTATTTATGGTAGTAGCTGCAACTCAGCGCAACTTTTA
TAACTGTGTGAAAAATAATTGAAATGGCCTTTGGTCTGTAATATATATAC
AAGATTAATCTCTTTCTACTTTAAAAAAAA
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