EH406307

Overview
NameEH406307
Unique NameEH406307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig452 contig Ccv1_Contig452:230..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT42_ARATH (Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.775e-51
Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 1
Query:   97 KYRLREYEVVVDRSTRRGPEVESIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPYP 435
            K RLREYEV +D+ T +GP++E IYFVILEM+PVTYIDSSAV+ALKDLY+EYK+R IQ+AISNPN EVLLTL+++G+V+LIGKEW+FVR HDAVQVC+ +V    +   +  P
Sbjct:  533 KDRLREYEVAIDKHTSKGPDMERIYFVILEMSPVTYIDSSAVEALKDLYEEYKTRGIQLAISNPNKEVLLTLARAGIVELIGKEWFFVRVHDAVQVCVHYVNRPTDVEESSKP 645          

HSP 2 Score: 61.2326 bits (147), Expect = 2.775e-51
Identity = 27/32 (84.38%), Postives = 31/32 (96.88%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N +QYPEAYTY+GIVIVRIDAPIYFANIS++K
Sbjct:  502 NMKQYPEAYTYNGIVIVRIDAPIYFANISYIK 533          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.044e-50
Identity = 82/124 (66.13%), Postives = 100/124 (80.65%), Query Frame = 1
Query:   97 KYRLREYEVVVDRSTRRGPEVESIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPYPLPDDKLSFLQR 468
            K RLREYEV VD+ T RG EV+ I FVILEM+PVT+IDSSAV+ALK+LYQEYK+RDIQ+AISNPN +V LT+++SG+V+L+GKEW+FVR HDAVQVCLQ+VQS          L D  LSF +R
Sbjct:  546 KDRLREYEVAVDKYTNRGLEVDRINFVILEMSPVTHIDSSAVEALKELYQEYKTRDIQLAISNPNKDVHLTIARSGMVELVGKEWFFVRVHDAVQVCLQYVQSSN--------LEDKHLSFTRR 661          

HSP 2 Score: 60.077 bits (144), Expect = 1.044e-50
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N +QYPEAYTY+GIVIVRID+PIYFANIS++K
Sbjct:  515 NIKQYPEAYTYNGIVIVRIDSPIYFANISYIK 546          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.607e-16
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  166 IYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVC 387
            I F+I+EM+PVT ID+S + AL+DLY+  + RDIQ+ ++NP   V+  L  S   D++G++  ++   DAV+ C
Sbjct:  572 IQFLIIEMSPVTDIDTSGIHALEDLYKSLQKRDIQLILANPGPLVIGKLHLSHFADMLGQDNIYLTVADAVEAC 645          

HSP 2 Score: 38.1206 bits (87), Expect = 2.607e-16
Identity = 14/32 (43.75%), Postives = 24/32 (75.00%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N QQYPEA    G++ +R+D+ IYF+N ++++
Sbjct:  519 NIQQYPEATMVPGVLTIRVDSAIYFSNSNYVR 550          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.724e-16
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1
Query:  166 IYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVC 387
            I F+I+EM+PVT ID+S + AL+DLY+  + RDIQ+ ++NP   V+  L  S   DLIG +  F+   +AV  C
Sbjct:  575 IQFLIIEMSPVTDIDTSGIHALEDLYKSLQKRDIQLVLANPGPPVINKLHVSHFADLIGHDKIFLTVAEAVDSC 648          

HSP 2 Score: 36.1946 bits (82), Expect = 5.724e-16
Identity = 13/32 (40.62%), Postives = 23/32 (71.88%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N  QYPEA    G++ +R+D+ IYF+N ++++
Sbjct:  522 NINQYPEATRIPGVLTIRVDSAIYFSNSNYVR 553          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.122e-15
Identity = 26/84 (30.95%), Postives = 51/84 (60.71%), Query Frame = 1
Query:  163 SIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVV-DLIGKEWYFVRAHDAVQVCLQHVQSLK 411
            S+ ++IL+M+ V  ID+S +  + ++ +    R +++ +SNP  EV+  L++S  + D +GKEW F+   +AV+ C   + + K
Sbjct:  562 SLQYIILDMSAVGNIDTSGISMMVEIKKVIDRRALKLVLSNPKGEVVKKLTRSKFIGDHLGKEWMFLTVGEAVEACSYMLHTFK 645          

HSP 2 Score: 46.595 bits (109), Expect = 2.122e-15
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            NT+QYP + T  GI+I+ IDAPIYFAN S+L+
Sbjct:  510 NTEQYPSSRTVPGILILEIDAPIYFANASYLR 541          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.047e-15
Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = 1
Query:  121 VVVDRSTRRGPEVESIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAV 378
            ++ + + R   E+  I  +I+EM+PVT ID+S + A ++LY+  + R++Q+ ++NP   V+  L  S + +LIG++  F+   DAV
Sbjct:  567 LIDEGAQRTESELPEIQHLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLMLANPGPVVIEKLHASNLAELIGEDKIFLTVADAV 652          

HSP 2 Score: 39.2762 bits (90), Expect = 6.047e-15
Identity = 15/32 (46.88%), Postives = 25/32 (78.12%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N QQYP+A    G++I+R+D+ IYF+N +++K
Sbjct:  529 NIQQYPKAEQIPGMLIIRVDSAIYFSNSNYIK 560          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 7.861e-15
Identity = 30/79 (37.97%), Postives = 51/79 (64.56%), Query Frame = 1
Query:  163 SIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHV 399
            +I FVI+EM+PVT ID+S + ++++L +  + ++IQ+ ++NP   V+  L  S  V+ IG++  F+   DAV VC   V
Sbjct:  566 AIRFVIIEMSPVTDIDTSGIHSIEELLKSLEKQEIQLILANPGPVVIEKLYASKFVEEIGEKNIFLTVGDAVAVCSTEV 644          

HSP 2 Score: 40.4318 bits (93), Expect = 7.861e-15
Identity = 16/36 (44.44%), Postives = 28/36 (77.78%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLKVQAT 110
            NT QYP+A    GI+I+R+D+ IYF+N ++++ +A+
Sbjct:  514 NTLQYPDAAQIPGILIIRVDSAIYFSNSNYVRERAS 549          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 6.381e-14
Identity = 30/94 (31.91%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  163 SIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPYPLPD 444
            S+ +++L+M+ V  ID+S +  L++L +    R++++ I+NP  EV+  LSKS  ++ IGKE  ++   +AV  C      +  TA    P+P+
Sbjct:  553 SLQYIVLDMSAVGNIDTSGISMLEELNKILGRRELKLVIANPGAEVMKKLSKSTFIESIGKERIYLTVAEAVAAC----DFMLHTAKPDSPVPE 642          

HSP 2 Score: 38.5058 bits (88), Expect = 6.381e-14
Identity = 15/32 (46.88%), Postives = 23/32 (71.88%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N + YP+A T   ++I+ ID PIYFAN ++L+
Sbjct:  501 NIEHYPQAITRSSLLILHIDGPIYFANSTYLR 532          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 8.282e-14
Identity = 28/86 (32.56%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  121 VVVDRSTRRGPEVESIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAV 378
            ++ + + R   E+  I  +I EM+PV  ID+S + A ++LY+  + R++Q+ ++NP   V+  L  S + +LIG++  F+   DAV
Sbjct:  572 LIDEGAQRTESELPEIQHLITEMSPVPDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTELIGEDKIFLTVADAV 657          

HSP 2 Score: 39.2762 bits (90), Expect = 8.282e-14
Identity = 15/32 (46.88%), Postives = 25/32 (78.12%), Query Frame = 3
Query:    3 NTQQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            N QQYP+A    G++I+R+D+ IYF+N +++K
Sbjct:  534 NIQQYPKAAQIPGMLIIRVDSAIYFSNSNYIK 565          
BLAST of EH406307 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.377e-11
Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = 1
Query:  154 EVESIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNPNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLK 411
            E E+I F++L+++ V+ ID + ++ L ++ +   S++I++ I NP  EVL  +  S  V+ IGKE+ F+   DAVQ C  ++ + K
Sbjct:  546 EPEAIEFLLLDLSGVSTIDMTGMETLLEIQRILGSKNIKMVIINPRFEVLEKMMLSHFVEKIGKEYMFLSIDDAVQACRFNLTTTK 631          

HSP 2 Score: 29.261 bits (64), Expect = 4.377e-11
Identity = 9/30 (30.00%), Postives = 22/30 (73.33%), Query Frame = 3
Query:    9 QQYPEAYTYHGIVIVRIDAPIYFANISFLK 98
            +QYP +    G +I+++ +P++FAN ++++
Sbjct:  507 EQYPASEEMLGYIILQLGSPVFFANSTYVR 536          
The following BLAST results are available for this feature:
BLAST of EH406307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SUT42_ARATH2.775e-5166.37Probable sulfate transporter 4.2 OS=Arabidopsis th... [more]
SUT41_ARATH1.044e-5066.13Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]
SUT12_ARATH2.607e-1641.89Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT13_ARATH5.724e-1644.59Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT31_ARATH2.122e-1530.95Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT2_STYHA6.047e-1533.72High affinity sulfate transporter 2 OS=Stylosanthe... [more]
SUT11_ARATH7.861e-1537.97Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]
SUT32_ARATH6.381e-1431.91Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT1_STYHA8.282e-1432.56High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT35_ARATH4.377e-1134.88Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AE12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406307 ID=EH406307; Name=EH406307; organism=Citrus clementina; type=EST; length=762bp
GAAACACTCAGCAATACCCAGAAGCATATACTTACCACGGAATAGTAATC
GTTCGCATAGATGCACCTATCTACTTTGCAAATATAAGTTTCCTAAAAGT
ACAGGCTACGGGAATATGAAGTTGTTGTTGATAGATCTACAAGGCGTGGA
CCGGAAGTTGAAAGTATTTACTTTGTGATCTTAGAGATGGCACCTGTTAC
CTATATCGATTCTAGTGCTGTTCAGGCCTTGAAAGACTTGTATCAAGAAT
ACAAATCAAGGGACATTCAGATTGCCATTTCCAATCCGAATCATGAGGTT
CTCCTGACTTTGTCCAAATCGGGTGTTGTTGATCTGATTGGCAAGGAGTG
GTACTTTGTGAGAGCCCATGATGCCGTTCAAGTTTGCCTCCAGCATGTAC
AGAGCTTGAAAGAAACTGCTAATGCACCTTATCCTTTACCTGATGACAAA
CTAAGTTTTCTCCAGAGATTACTCAAATCTCGTGGGGAAGATTTATCAAT
TGCTGAGCTAGAGTCGGGTGCTCAAAGGCCTCCAGATTTCAAGGACACGG
ACCCTAAGTTGGAGCCCCTACTATATCGCAAGTCGTGAATTTGCATTCTT
GCTTCTCCCTCAAACATAAAATGATGCCAATTTTTAGCAAGGCATGTAAA
TGTCTTTTGTCCGGCTGCAGCCATTAAAATTTGATTGTTTCTTGTAGTTA
GTCTCCCTTAAGTGTAAAATGTAATGCCATATGCTGCAAATATAGACTTC
GATTTCTTGTAA
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