FC868490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868490 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.602e-44 Identity = 111/201 (55.22%), Postives = 126/201 (62.69%), Query Frame = 3 Query: 108 MALTREFMGAFSIFERXXXXXXXKVLLNQSTFWQNKLLQQKQFLV-PVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAV------PGAAERPVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQ 689 MAL E MG+ IFER S F K Q+ QF + P R + R ++GV VAA+SEDLVK S V E+ VKFKVRAV TV+ KEDFKETLV DA T+KIGRNVVLEL+ T+VDP+T PKKS+ AVLKDWSKKSN KAERVHYTAEF VDS FG+PGAITV NKHQ Sbjct: 1 MALANEIMGSRLIFERSSSLASPF----HSRFSIKKKTQRTQFSINPFDPRPM--RAVNSSGV-------VAAISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDFKETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTAEFTVDSAFGSPGAITVTNKHQ 188
BLAST of FC868490 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.399e-41 Identity = 103/200 (51.50%), Postives = 118/200 (59.00%), Query Frame = 3 Query: 108 MALTREFMGAFSIFERXXXXXXXKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPG------AAERPVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQ 689 MAL +E MG I ER L S K Q QF + RR K+G VAA+SEDLVK S G + VKFKVRAV+TV+ KED KETLV DA +KIGRN+VLEL+ T++DP+TK PKKS AVLKDWSKKS KAERVHYTAEF VD+ FG+PGAITV NKHQ Sbjct: 1 MALAKELMGYPLITERSS--------LVSSASHFKKRTQSTQFSINPFDRRPRKTKSGV----------VAAISEDLVKTLRFSTTTGDRKSEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQ 182
BLAST of FC868490 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27 Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 315 VAALSEDLVKGAASSAVP----GAAER---PVKFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKH 686 VAA+SE++ + AAS + GA ER P K +RA LTV++ KED KE + DAL + +GRNVVLEL+ T++ PRTK P +S +KDW +K K + V YTAEF VD++FG PGAI VAN+H Sbjct: 45 VAAISEEVPRLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVDADFGEPGAIAVANRH 175
BLAST of FC868490 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27 Identity = 69/150 (46.00%), Postives = 89/150 (59.33%), Query Frame = 3 Query: 276 AGAAGVRRGINN--------PVAALSEDLVKGAASSAVPGAAERPV----KFKVRAVLTVKKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQ 689 AG+ G+ +G + PV AL E +V A A RP RAV+TV++ KED K+ Q DAL +++GR+V+LELV TE DPR PKKS+ + L W K +VKAERV YTAEF VD+ FG PGA+TV N+HQ Sbjct: 15 AGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAARAVVTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQ 164 The following BLAST results are available for this feature:
BLAST of FC868490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868490 ID=FC868490; Name=FC868490; organism=Citrus clementina; type=EST; length=691bpback to top |