FC868505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868505 vs. ExPASy Swiss-Prot
Match: TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31 Identity = 78/177 (44.07%), Postives = 104/177 (58.76%), Query Frame = 2 Query: 122 DEVKPKAEAGMEVDDKKKHEVALNDAGSAAGLDLLGNEVFNNTIRATAIPTSGVNATDLAPTQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKTDNTNCPTSSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYP 652 DE + E G V D + GS E N +R+T I T+ + P QLTIF+GG V VFD +P++KV+EI+ IAA + N++ + P SSP L R+PS ST++ +ASP AQ +P+Q C+ A+LP+ARRHSLQRF EKRRDRLV+KNPYP Sbjct: 6 DEPRASVEGGCGVADGDGGAAEIGGTGSV--------EKSINEVRSTEIQTA---EPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSIS------PVSSPALNRAPSFSSTSN-VASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYP 164
BLAST of FC868505 vs. ExPASy Swiss-Prot
Match: TIF3A_ARATH (Protein TIFY 3A OS=Arabidopsis thaliana GN=TIFY3A PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14 Identity = 61/180 (33.89%), Postives = 87/180 (48.33%), Query Frame = 2 Query: 119 VDEVKPKAEAGMEVDDKKKHEVALNDA---GSAAGLDLLGNEVFNNTIRATAIPTSGVNATDLAPTQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKTDNTNCPTSSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPY 649 V E+ A AG + + ALN A + A L + + ++ + + + P+QLTI +GG VFD IPA+KV+EI+ IAA++ T+ N + +P L R+ S S AS +A C A++P+ARR SLQRFFEKRR R V PY Sbjct: 65 VQEIIRIAFAGKQTKNVTGINPALNRALSFSTVADLPIARRRSLQRFLEKRRDRSTKPDGSMILPSQLTIIFGGSFSVFDGIPAEKVQEILHIAAAAKA--------TETINLTSINPALKRAISF-SNASTVA--------------CVSTADVPIARRRSLQRFFEKRRHRFVHTKPY 221
BLAST of FC868505 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 2 Query: 311 LTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKTDNTNCPTSSPVLTRSPSLQSTASALASPR--AQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYPVQIRAKAS 676 LTIFYGG+V VFD A+K +E++ +A + + T N N S + S+ + + SP A P+Q N L ELP+ARR SL RF EKR+DR+ SK PY + A+AS Sbjct: 120 LTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYS-----QKEIASSPNPVCSPAKTAAQEPIQPNP-ASLACELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEAS 237
BLAST of FC868505 vs. ExPASy Swiss-Prot
Match: TI11A_ARATH (Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 47/123 (38.21%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 305 TQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVT--NTSDMKTDNTNCPTSSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRLVSKNPYPVQIRA 667 +QLTIF+GGKV V++ P DK +EIM +A + VT N D N SS VL P L + Q ++N + + +ARR SL RFF KR+DR V++ PY V A Sbjct: 97 SQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVL---PDLNEPTDNNHLTKEQQQQQEQNQIVE-----RIARRASLHRFFAKRKDRAVARAPYQVNQNA 211 The following BLAST results are available for this feature:
BLAST of FC868505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868505 ID=FC868505; Name=FC868505; organism=Citrus clementina; type=EST; length=676bpback to top |