FC868526

Overview
NameFC868526
Unique NameFC868526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6394 contig Ccv1_Contig6394:585..1309. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: OPDA_SALTY (Oligopeptidase A OS=Salmonella typhimurium GN=prlC PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.182e-35
Identity = 81/221 (36.65%), Postives = 136/221 (61.54%), Query Frame = 2
Query:   77 SKGHENATAENGPWIITLDAPSFMSVMQHAKNRVLREEVYRAYVSRAS-----SGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKDSSXSPNAYFYFDPYSR 721
            +K    A  + G +++TLD PS++ VM +  N+ LREE+YRAY +RAS     +G  DN+P+++ IL LR E A+LLG++NYA  S+A KMA    +  + L  L   +     +++  L++F+K++  +E  +L  WDI+++SE+ ++  Y I++E+LRPYF   K ++GLF + K ++GI  +    +  VW+ +VRF+ + D +      FY D Y+R
Sbjct:  198 AKAQAEAKEQEG-YLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSPVMEEILALRHELAQLLGFENYAHESLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVE--ELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERTDV-DVWHPEVRFFELYDENNELRGSFYLDLYAR 414          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: OPDA_HAEIN (Oligopeptidase A OS=Haemophilus influenzae GN=prlC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.155e-34
Identity = 80/205 (39.02%), Postives = 124/205 (60.49%), Query Frame = 2
Query:  125 TLDAPSFMSVMQHAKNRVLREEVYRAYVSRAS-----SGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKDSSXSPNAYFYFDPYSR 721
            TL+ PS++ VM + +NR LREE+YRAY +RAS     +G  DN+ +++ IL LR+E AKLLG+  Y E+S+A KMA    +  + L+ L   +     +++++LK + + +  +   +L  WDI F+SE+ ++  Y IN+EELRPYF   +V+ GLF L K +F I      G+   W+ DVRF+ + D +      FY D Y+R
Sbjct:  214 TLEIPSYLPVMTYCENRALREEMYRAYATRASEQGPNAGKWDNSKVMEEILTLRVELAKLLGFNTYTELSLATKMAENPQQVLDFLDHLAERAKPQGEKELQELKGYCEKEFGVT--ELAPWDIGFYSEKQKQHLYAINDEELRPYFPENRVISGLFELIKRIFNIRAVERKGV-DTWHKDVRFFDLIDENDQLRGSFYLDLYAR 415          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: OPDA_ECOLI (Oligopeptidase A OS=Escherichia coli (strain K12) GN=prlC PE=3 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 5.730e-34
Identity = 78/208 (37.50%), Postives = 130/208 (62.50%), Query Frame = 2
Query:  116 WIITLDAPSFMSVMQHAKNRVLREEVYRAYVSRAS-----SGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKDSSXSPNAYFYFDPYSR 721
            +++TLD PS++ VM +  N+ LREE+YRAY +RAS     +G  DN+ +++ IL LR E A+LLG++NYA  S+A KMA    +  + L  L   +     +++  L++F+K++  +  D+L  WDI+++SE+ ++  Y I++E+LRPYF   K ++GLF + K ++GI  +    +  VW+ DVRF+ + D +      FY D Y+R
Sbjct:  210 YLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGV--DELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDV-DVWHPDVRFFELYDENNELRGSFYLDLYAR 414          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: DCP_ECOLI (Peptidyl-dipeptidase dcp OS=Escherichia coli (strain K12) GN=dcp PE=1 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 65/207 (31.40%), Postives = 118/207 (57.00%), Query Frame = 2
Query:  116 WIITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNT-PIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKS-FSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVM-DGLFNLAKTLFGID-IEPADGLAPVWNNDVRFYCVKDSSXSPNAYFYFDPYSR 721
            W+I L   +    +   ++R  RE+++ A  +RA   D ++T  II R++++R ++A LLG+ +YA   +A +MA T + A   + ++  A+   A  ++  +++   K QG   A     WD +F++E++R  K++++E +L+PYF L  V+ +G+F  A  LFGI  +E  D   PV++ DVR + + D +    A FY D ++R
Sbjct:  217 WLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP---WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFD--IPVYHPDVRVWEIFDHNGVGLALFYGDFFAR 418          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: DCP_SALTY (Peptidyl-dipeptidase dcp OS=Salmonella typhimurium GN=dcp PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18
Identity = 65/206 (31.55%), Postives = 110/206 (53.40%), Query Frame = 2
Query:  116 WIITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNT-PIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVM-DGLFNLAKTLFGID-IEPADGLAPVWNNDVRFYCVKDSSXSPNAYFYFDPYSR 721
            W I L   +    +   ++R  RE ++ A  +RA  GD  +T  I+ R++++R  +AKLLG+ NYA   MA +MA T   A   +  +   +    + +  ++++     G      +  WD  F++E++R  KY ++E +L+PYF+L  V+ +G+F  A  LFGI  +E  D   PV++ DVR + + DS     A FY D ++R
Sbjct:  216 WFIPLLNTTQQPALATLRDRQTRENLFAASWTRAEKGDAHDTRAIVQRLVEIRRCQAKLLGFPNYAAWKMADQMAKTPQAALSFMRGIVPPARQRVLNEQAEIQNVI--DGEQGGYTVQAWDWMFYAEQVRREKYALDEAQLKPYFALNTVLQEGVFWTANQLFGITFVERFD--IPVYHPDVRVWEIFDSDGVGMALFYGDFFAR 417          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: NEUL_BOVIN (Neurolysin, mitochondrial OS=Bos taurus GN=NLN PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 63/206 (30.58%), Postives = 100/206 (48.54%), Query Frame = 2
Query:  122 ITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMATVDK---AF--ELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKD-SSXSPNAYFYFDPYSR 721
            ITL  P +  VM+       R ++  A+ +R      +NT I+ ++L LR E A+LLGY  +A+  + M  A   +   AF  +L +KL+          +   K   K +G     K++ WD+ ++  +  E KY +++E L+ YF +  V +GL N+ + L G+  E     A VWN  V  Y VKD ++      FY D Y R
Sbjct:  241 ITLKYPHYFPVMKKCCVPETRRKMEMAFNTRCKE---ENTVILQQLLPLRAEVARLLGYSTHADFVLEMNTAKSTRHVTAFLDDLSQKLKPLGEAEREFILNLKKKECKERGFEYDGKINAWDLHYYMTQTEELKYSVDQETLKEYFPIEVVTEGLLNIYQELLGLSFEQVTD-AHVWNKSVTLYTVKDKATGEVLGQFYLDLYPR 442          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: NEUL_RAT (Neurolysin, mitochondrial OS=Rattus norvegicus GN=Nln PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 58/206 (28.16%), Postives = 98/206 (47.57%), Query Frame = 2
Query:  122 ITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQ----GALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKD-SSXSPNAYFYFDPYSR 721
            +TL  P +  VM+       R ++  A+ +R      +NT I+ ++L LR + AKLLGY  +A+  + +  A +  +    L+ L          + E + S  K +    G     K++ WD+ ++  +  E KY +++E L+ YF +  V +GL ++ + L G+  E     A VWN  V  Y VKD ++      FY D Y R
Sbjct:  241 VTLKYPHYFPVMKKCCVPETRRKMEMAFHTRCKQ---ENTAILQQLLPLRAQVAKLLGYNTHADFVLELNTAKSTSRVAAFLDDLSQKLKPLGEAEREFILSLKKKECEERGFEYDGKINAWDLHYYMTQTEELKYSVDQESLKEYFPIEVVTEGLLSIYQELLGLSFEQVPD-AHVWNKSVSLYTVKDKATGEVLGQFYLDLYPR 442          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: NEUL_RABIT (Neurolysin, mitochondrial OS=Oryctolagus cuniculus GN=NLN PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 2
Query:  122 ITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQ----GALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEP-ADGLAPVWNNDVRFYCVKD-SSXSPNAYFYFDPYSR 721
            ITL  P +  VM+       R  +  A+ +R      +NT I+ ++L LR + AKLLGY  +A+  + M  A +  +    L+ L          + E + S  K +    G     K++ WD+ ++  +  E KY I++E ++ YF +  V +GL N+ + L G+  E  AD  A VWN  V  Y VKD ++      FY D Y R
Sbjct:  241 ITLKYPHYFPVMKKCCIPETRRRMEMAFNTRCKE---ENTVILQQLLPLRAQVAKLLGYSTHADFVLEMNTAKSTSRVTAFLDDLSQKLKPLGEAEREFILSLKKKECEEKGFEYDGKINAWDLHYYMTQTEELKYSIDQEFIKEYFPIEVVTEGLLNIYQELLGLSFEQVAD--AHVWNPSVTLYTVKDKATGEVLGQFYLDLYPR 442          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: NEUL_PIG (Neurolysin, mitochondrial OS=Sus scrofa GN=NLN PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 64/213 (30.05%), Postives = 105/213 (49.30%), Query Frame = 2
Query:  104 ENGPWIITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMATVDK---AF--ELLEKLQSASWDPAVQDMEDLKSFSKSQGALEAD-KLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKD-SSXSPNAYFYFDPYSR 721
            ++  + ITL  P +  VM+       R ++  A+ +R      +NT I+  +L LR + AKLLGY  +A+  + M  A       AF  +L +KL+    +   + + +LK     +   E D K++ WD+ ++  +  E KY +++E L+ YF +  V +GL N+ + L G+  E     A VWN  V  Y VKD ++      FY D Y R
Sbjct:  235 DDNKYKITLKYPHYFPVMKKCCIPETRRKMEMAFNTRCKE---ENTIILQELLPLRAKVAKLLGYSTHADFVLEMNTAKSTHHVTAFLDDLSQKLKPLG-EAEREFILNLKKKECEEKGFEYDGKINAWDLHYYMTQTEELKYSVDQEILKEYFPIEVVTEGLLNIYQELLGLSFEQVTD-AHVWNKSVTLYTVKDKATGEVLGQFYLDLYPR 442          
BLAST of FC868526 vs. ExPASy Swiss-Prot
Match: THOP1_BOVIN (Thimet oligopeptidase OS=Bos taurus GN=THOP1 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 52/206 (25.24%), Postives = 102/206 (49.51%), Query Frame = 2
Query:  122 ITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMATVDKAF-----ELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKD-SSXSPNAYFYFDPYSR 721
            +TL  P +  +++       R +V  A+  R      +N  I+  +++LR +K++LLG+  +A+  + M MA   +       EL +KL+          +E  ++  + +G     +++ WD+ ++  ++ E++Y +++  L+ YF +  V  GL  + + L G+  +  +G A VW+ DV  Y V+D +S      FY D Y R
Sbjct:  217 VTLKYPHYFPLLKKCHVPETRRKVEEAFNCRCKE---ENCAILRELVRLRAQKSRLLGFSTHADYVLEMNMAKTSQVVATFLDELAQKLKPLGEQERAVILELKRAECEQRGLAFDGRINAWDMRYYMNQVEETRYRVDQNLLKEYFPMQVVTRGLLGIYQELLGLSFQLEEG-AAVWHEDVALYAVRDAASGKLIGKFYLDLYPR 418          
The following BLAST results are available for this feature:
BLAST of FC868526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
OPDA_SALTY5.182e-3536.65Oligopeptidase A OS=Salmonella typhimurium GN=prlC... [more]
OPDA_HAEIN1.155e-3439.02Oligopeptidase A OS=Haemophilus influenzae GN=prlC... [more]
OPDA_ECOLI5.730e-3437.50Oligopeptidase A OS=Escherichia coli (strain K12) ... [more]
DCP_ECOLI1.370e-1931.40Peptidyl-dipeptidase dcp OS=Escherichia coli (stra... [more]
DCP_SALTY3.375e-1831.55Peptidyl-dipeptidase dcp OS=Salmonella typhimurium... [more]
NEUL_BOVIN3.731e-1730.58Neurolysin, mitochondrial OS=Bos taurus GN=NLN PE=... [more]
NEUL_RAT2.419e-1628.16Neurolysin, mitochondrial OS=Rattus norvegicus GN=... [more]
NEUL_RABIT2.419e-1630.43Neurolysin, mitochondrial OS=Oryctolagus cuniculus... [more]
NEUL_PIG3.159e-1630.05Neurolysin, mitochondrial OS=Sus scrofa GN=NLN PE=... [more]
THOP1_BOVIN4.125e-1625.24Thimet oligopeptidase OS=Bos taurus GN=THOP1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31001E06EF AbioticL1 Citrus clementina cDNA clone C31001E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868526 ID=FC868526; Name=FC868526; organism=Citrus clementina; type=EST; length=725bp
CCCCGGGATAAGAGATAAGAAAGAAATTGATCCATTACCTGCCACTGCTC
TTGGTTTGGCTGCACAAACAGCGTTGTCCAAGGGGCATGAAAATGCAACT
GCTGAGAATGGGCCATGGATAATTACATTGGACGCTCCAAGTTTTATGTC
CGTCATGCAACATGCTAAAAATCGTGTTTTGCGTGAGGAAGTCTATCGAG
CTTATGTGAGTCGTGCCTCCAGTGGTGATTTGGACAATACACCAATCATT
GACCGAATATTGAAGCTTAGGTTGGAAAAGGCTAAACTTCTCGGTTACAA
AAACTATGCTGAGGTGAGCATGGCAATGAAAATGGCTACTGTTGACAAAG
CATTTGAGCTGCTAGAAAAGCTTCAGAGTGCTTCCTGGGACCCTGCAGTT
CAAGACATGGAAGACCTTAAAAGTTTTTCCAAAAGTCAAGGTGCATTAGA
AGCTGACAAATTGGACCATTGGGACATCAGTTTTTGGAGTGAGAGACTTC
GTGAGTCAAAATATGAGATCAATGAGGAAGAACTTCGGCCATATTTCTCA
TTGCCAAAAGTTATGGATGGCCTTTTCAATCTTGCGAAGACACTTTTTGG
AATCGATATCGAACCGGCTGATGGTCTAGCTCCTGTTTGGAACAATGATG
TCAGATTCTATTGTGTCAAAGATTCTTCANGTAGTCCAAATGCATACTTC
TATTTTGATCCATATTCCCGTCCAT
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