FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:1..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.534e-56
Identity = 115/168 (68.45%), Postives = 136/168 (80.95%), Query Frame = 1
Query:  154 TAIQTPQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMM 657
            +A +   PA ++ +      FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVLEALGVV+DL PEG++RCV+E GIGFMM
Sbjct:   88 SAAEALPPACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIGFMM 255          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.001e-31
Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 1
Query:  205 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL+  M+  A  V  +G+A+DIVG+GGD A+TVNIST A+I+AAA G  VAK             D+LEALGV IDLD  GV RC++ AGIGF
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIVGSGGDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAIDLDGAGVARCIERAGIGF 154          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_SACEN (Anthranilate phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            L+  L++  DL+  +   ++D ++  EA  A ++AF+V LRAKGET  E+ G+A AM+ ++  +E    AVDIVGTGGD + +VNIST ASI+ AA G  V K             DVLEALGV IDL PEGVRRCV++ GIGF
Sbjct:   11 LLGHLVAGNDLSAEDTAWAMDLVMTGEATPARVAAFVVALRAKGETPAEVRGMADAMLSHSRPLEIRRRAVDIVGTGGDRSGSVNISTMASIVVAAAGVPVVKHGNRAASSKCGTADVLEALGVAIDLPPEGVRRCVEDLGIGF 154          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  226 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +  ++++  LT  EA++  + +LN +D   I+AFL +L+ +GET  EI G+  A+ K AT V+    A+DIVGTGGD ANTVNISTG++IL+AACG  +AK             DVLEALG+ I++ PE +  C+ E GIGFM
Sbjct:    6 LQSIMNQSHLTYDEAESVTNLMLNGSDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIGFM 148          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.552e-27
Identity = 71/146 (48.63%), Postives = 90/146 (61.64%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  +++R DLT+AEA + ++ ++N  A  A I+AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ +AGIGFM
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIGFM 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.334e-27
Identity = 67/143 (46.85%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  226 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +  ++++  LT  E ++  + +LN AD   I+AFL +L+ +GET  E+ G+  A+ K AT V     A+DIVGTGGD ANTVNISTG++ILAAACG  +AK             DVLEALG+ I++ PE +  CV E GIGFM
Sbjct:    6 LQSIMNQSHLTYDEVESVTNLMLNGADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIGFM 148          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.686e-27
Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ EAGIGFM
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFM 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.686e-27
Identity = 71/146 (48.63%), Postives = 89/146 (60.96%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ EAGIGFM
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFM 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_ARTS2 (Anthranilate phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.211e-26
Identity = 69/144 (47.92%), Postives = 89/144 (61.81%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            LI  LI+  DLT    + ++D +++ EA  + I+ FLV LR+KGET  EI GL  AM+ +A  V+  G+ +DIVGTGGD  NTVNIST A+++ A  GAKV K             DVLEALGV +DL  E V R  +EAGI F
Sbjct:   17 LISALINGADLTADNTEWAMDTIMSGEATPSQIAGFLVALRSKGETVDEIAGLVEAMLAHANPVDIAGEKLDIVGTGGDQLNTVNISTMAALVCAGAGAKVVKHGNRASSSSSGSADVLEALGVRLDLPIERVARNAEEAGITF 160          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.401e-25
Identity = 67/149 (44.97%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMM 657
            F   I  L +   LT AEA+A+ D +   E   A +  FL+ +R +GET  EI+G   AM     +V+   DA+DIVGTGGDG  T N+ST AS++ AACG  VAK             DVL ALGV   LD  GV  C+  AGIGFMM
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGVRTGLDSAGVEACIRGAGIGFMM 152          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARATH1.534e-5668.45Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC11.001e-3150.67Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
TRPD_SACEN2.552e-2748.61Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_CHLFF2.552e-2746.15Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLAD2.552e-2748.63Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLCV3.334e-2746.85Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLSY5.686e-2748.63Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA5.686e-2748.63Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_ARTS28.211e-2647.92Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_BEII91.401e-2544.97Anthranilate phosphoribosyltransferase OS=Beijerin... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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