FC868546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 1.715e-86 Identity = 145/182 (79.67%), Postives = 164/182 (90.11%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR FVDHP FL +VWGKT SK+YGP+TG DY+DNQLRF +LCQAALEAPR+LNLNS+KYFSGPYGEDV+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF DF LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+E +SGED GVELDNI Sbjct: 155 DRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLNLNSSKYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSDFSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRGVELDNI 336
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 4.672e-84 Identity = 145/182 (79.67%), Postives = 158/182 (86.81%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR FVDHP FL KVWGKT+SKIYGP G DYQDNQLRF +LCQAALEAPR+LNL S+KYFSGPYGEDVVFVANDWHT+L+PCYLK+MY+ KGMY AKV FCIHNIAYQGRF DF LLNLP QFKSSFDF DGY KPV+GRKINWMKAGILESD V+TVSP+YA E VSG + GVELDN+ Sbjct: 160 DRVFVDHPIFLEKVWGKTKSKIYGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDGYEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNV 341
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 7.969e-84 Identity = 144/181 (79.56%), Postives = 159/181 (87.85%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDN 549 DR FVDHP FL KVWGKT SKIYGPR G DYQDNQLRF +LC AALEAPR+LNLNS+K FSGPYGE+V F+ANDWHT+L+PCYLKA+Y+P G+YK AKV FCIHNIAYQGRFAF DF LNLP +FKSSFDFIDGY KPV+GRKINWMKAGILESD VLTVSP+YAQE +SG + GVELDN Sbjct: 160 DRVFVDHPMFLEKVWGKTGSKIYGPRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIANDWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFIDGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDN 340
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 2.834e-81 Identity = 141/179 (78.77%), Postives = 159/179 (88.83%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVEL 543 DR FVDHP FLAKV GKT SKIYGP TG DY DNQLRF +LCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDWHT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DGY KPV+GRKINWMKA ILE+ VLTVSP+YAQE +SG D GVEL Sbjct: 162 DRVFVDHPIFLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVEL 340
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 4.834e-81 Identity = 137/182 (75.27%), Postives = 159/182 (87.36%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR FVDHP FL KVWGKT SKIYGP+ G DY DN+LRF +LCQAALEAP++LNLNS+ YFSGPYGEDV+F+ANDWHT+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY KPV+GRKINWMKAGILES V+TVSP+YAQE VS D GVELD++ Sbjct: 159 DRVFVDHPMFLEKVWGKTGSKIYGPKAGLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGEDVLFIANDWHTALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGYEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSV 340
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 8.246e-81 Identity = 137/181 (75.69%), Postives = 157/181 (86.74%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDN 549 DR FVDHP FL KVWGKT S +YGP+ G+DY+DNQLRF +LCQAALEAPR+LNLNS+ YFSGPYGEDVVFVANDWHT+L+PCYLK MY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFIDGY+KPV+GRKINWMKAGI E+D V TVSP+YA+E VS GVELDN Sbjct: 160 DRVFVDHPMFLEKVWGKTGSMLYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVFVANDWHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFIDGYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDN 340
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 2.933e-78 Identity = 134/182 (73.63%), Postives = 155/182 (85.16%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR F+DHP FL KV GKT+ KIYGP G DY+DNQ RF +LCQAALEAPRILNLN+N YFSGPYGEDVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIHNI+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+YA+E +SGE G ELDNI Sbjct: 154 DRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLCQAALEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNI 335
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 6.534e-78 Identity = 134/182 (73.63%), Postives = 151/182 (82.97%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR F+DHP FL +VWGKT+ KIYGP G DY+DNQLRF +LCQAALEAPRIL+LN+N YFSGPYGEDVVFV NDWHT + CYLK+ Y+ G+YK AK FCIHNI+YQGRFAF DF LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+E +SG G ELDNI Sbjct: 160 DRVFIDHPLFLERVWGKTEEKIYGPDAGTDYKDNQLRFSLLCQAALEAPRILSLNNNPYFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSNGIYKDAKTAFCIHNISYQGRFAFSDFPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNI 341
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 4.235e-77 Identity = 133/182 (73.08%), Postives = 151/182 (82.97%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR FVDHP FL +VWGKT+ KIYGP G DY+DNQLRF +LCQAALEAPRIL+LN+N YFSGPYGEDVVFV NDWHT + CYLK+ Y+ G+Y+ AK FCIHNI+YQGRFAF D+ LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+E +SG G ELDNI Sbjct: 155 DRVFVDHPLFLERVWGKTEEKIYGPVAGTDYRDNQLRFSLLCQAALEAPRILSLNNNPYFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSHGIYRDAKTAFCIHNISYQGRFAFSDYPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNI 336
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 5.531e-77 Identity = 131/182 (71.98%), Postives = 153/182 (84.07%), Query Frame = 1 Query: 7 DREFVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DR FVDHP FL KVWGKT SK+YGP TG D++DNQLRF +LC AALEAPR+LNLN+++YFSGPYGE+VVFVANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SFDF+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +E SG + GVELD + Sbjct: 116 DRVFVDHPMFLEKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGV 297 The following BLAST results are available for this feature:
BLAST of FC868546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868546 ID=FC868546; Name=FC868546; organism=Citrus clementina; type=EST; length=552bpback to top |