FC868556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868556 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 68/144 (47.22%), Postives = 92/144 (63.89%), Query Frame = 1 Query: 271 TGILVEELNRISTENKKLNEMLSILCKNYNNLRQQYMDLMNKNT---ENEVGISKKRKAESEDH---CHTIGFNVHAXXXXXXXXXXXCKRPKDNNTKAKVSRFYVRASDSKFTLIVKDGYQWRKYGQKVTKRHPSPRAYFQCS 684 T LVEELNR+S ENKKL+EML+++C NYN LR+Q M+ +NK+ +++ KKRK+ + + C IG V K+ ++ K KVSR Y + S TL+VKDGYQWRKYGQKVT+ +PSPRAYF+C+ Sbjct: 30 TSALVEELNRVSAENKKLSEMLTLMCDNYNVLRKQLMEYVNKSNITERDQISPPKKRKSPAREDAFSCAVIG-GVSESSSTDQDEYLCKKQREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCA 172
BLAST of FC868556 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.404e-23 Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 193 SSEVPKREFKGDHFAEFEERASVKQETGI-LVEELNRISTENKKLNEMLSILCKNYNNLRQQYMDLMNKNT----ENEVGISKKRK--------------------AESEDHCHTIGFNVHAXXXXXXXXXXXCKRP-KDNNTKAKVSRFYVRASDSKFTLIVKDGYQWRKYGQKVTKRHPSPRAYFQCS 684 S+++PK+E + + + E+ L EELNR+++ENKKL EML+ +C++YN L L ++ + + ++ I K+++ + +EDH H H CKRP D+ KAKVS YV S +L VKDG+QWRKYGQKVT+ +PSPRAYF+CS Sbjct: 19 SAKLPKKEVSVLASTHLKRKWLEQDESASELREELNRVNSENKKLTEMLARVCESYNELHNHLEKLQSRQSPEIEQTDIPIKKRKQDPDEFLGFPIGLSSGKTENSSSNEDHHH------HHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCS 202
BLAST of FC868556 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = 1 Query: 193 SSEVPKREFKGDHFAEFEERASVKQET-GILVEELNRISTENKKLNEMLSILCKNYNNLRQQYMDLMNKNTENEVG-----ISKKRKAESEDHCHT-IGFNVHAXXXXXXXXXXXCKRPKDN--NTKAKVSRFYVRASDSKFTLIVKDGYQWRKYGQKVTKRHPSPRAYFQCS 684 S ++PKRE E++ VK E +L +E+NR+++ENKKL EML+ +C+ Y L +L ++ + V ++ KRK E ++ + IG ++ P +N N KA VS Y A S +L VKDGYQWRKYGQK+T+ +PSPRAYF+CS Sbjct: 15 SGKLPKREVSASASKVVEKKWLVKDEKRNMLQDEINRVNSENKKLTEMLARVCEKYYALNNLMEELQSRKSPESVNFQNKQLTGKRKQELDEFVSSPIGLSLG---------------PIENITNDKATVSTAYFAAEKSDTSLTVKDGYQWRKYGQKITRDNPSPRAYFRCS 172 The following BLAST results are available for this feature:
BLAST of FC868556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868556 ID=FC868556; Name=FC868556; organism=Citrus clementina; type=EST; length=685bpback to top |