FC868569

Overview
NameFC868569
Unique NameFC868569
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9358 contig Ccv1_Contig9358:1..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 7.049e-73
Identity = 128/175 (73.14%), Postives = 150/175 (85.71%), Query Frame = 2
Query:  143 GVQAARFNRRDSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            G+ A+R N  +  IL+P+E+             TRWAVLVAGS G+ NYRHQADVCHAYQLLRKGGLKEE+I+VFMYDDIA +ELNPRPGVIINHPQGE++Y GVPKDYTGEHVTA+NLYAVLLGD+ AV+GGSGKVV+SK NDRIF++YSDHGGPGVLGMPN+PY+YAM+FI+V
Sbjct:   28 GLLASRLNPFEPGILMPTEEAEPVQVDDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLYYSDHGGPGVLGMPNLPYLYAMDFIEV 202          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.228e-68
Identity = 126/174 (72.41%), Postives = 145/174 (83.33%), Query Frame = 2
Query:  152 AARFNRR--DSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            AAR NR+  DS I LP+E              TRWAVLVAGS+GY NYRHQADVCHAYQLL KGGLKEE+IVVFMYDDIA +ELNPR GVIINHP+GE+LY GVPKDYTG++VT +NL+AV+LGD+  +KGGSGKV+NSK  DRIFI+YSDHGGPG+LGMPNMPY+YAM+FIDV
Sbjct:   31 AARPNRKEWDSVIKLPTEP----VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIYYSDHGGPGILGMPNMPYLYAMDFIDV 200          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.917e-68
Identity = 127/174 (72.99%), Postives = 141/174 (81.03%), Query Frame = 2
Query:  152 AARFNRR--DSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            AAR NRR  DS I LP+E              TRWAVLVAGS+GY NYRHQADVCHAYQLL KGG+KEE+IVVFMYDDIA + +NPRPGVIINHPQG ++Y GVPKDYTGE VT +NLYAV+LGD+  VKGGSGKV+NS   DRIFIFYSDHGGPGVLGMPN P+VYAM+FIDV
Sbjct:   14 AARLNRREWDSVIQLPTEP-------VDDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPEDRIFIFYSDHGGPGVLGMPNAPFVYAMDFIDV 180          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.165e-67
Identity = 122/174 (70.11%), Postives = 141/174 (81.03%), Query Frame = 2
Query:  146 VQAARFNRRDSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            +Q      +DS I LP+++             TRWAVLVAGS+GY NYRHQADVCHAYQLL KGG+KEE+IVVFMYDDIA HELNPRPGVIIN+PQG ++Y GVPKDYTGE VT+ N +AVLLGD+  VKGGSGKV+NSK  DRIF++YSDHGGPGVLGMPNMPY+YAM+FIDV
Sbjct:   29 IQGTNGKEQDSVIKLPTQE----VDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVYYSDHGGPGVLGMPNMPYLYAMDFIDV 198          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 245.358 bits (625), Expect = 2.056e-64
Identity = 117/173 (67.63%), Postives = 136/173 (78.61%), Query Frame = 2
Query:  146 VQAARFNRRDSAILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFID 664
            V A    R +  IL+P+E +            TRWAVLVAGSSGY NYRHQADVCHAYQ+LRKGGLKEE+IVV MYDDIA H LNPRPG +INHP G+++Y GVPKDYTG  VTA N YAVLLGD+KAVKGGSGKV+ SK ND IF++Y+DHGGPGVLGMPN P++YA +FI+
Sbjct:   19 VHAESRGRFEPKILMPTE-EANPADQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGPGVLGMPNTPHIYAADFIE 190          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.167e-59
Identity = 108/142 (76.06%), Postives = 121/142 (85.21%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            TRWAVLVAGSSGY NYRHQAD+CHAYQLLRKGGLKEE+IVVFMYDDIA +  NPRPG IIN P G+++Y GVPKDYTG+ V   NL+AV+LGD+ AVKGGSGKVV+S  ND IFIFYSDHGGPGVLGMP  PY+YA +  DV
Sbjct:   58 TRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSPYLYANDLNDV 199          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.436e-59
Identity = 104/142 (73.24%), Postives = 123/142 (86.62%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            TRWAVL+AGS+G+ NYRHQAD+CHAYQLLRKGGLK+E+I+VFMYDDIA +E NPRPGVIINHP G+++Y GVPKDYTGE VT +  +AV+LG++ A+ GGSGKVV+S  ND IFIFYSDHGGPGVLGMP   Y+YA E IDV
Sbjct:   59 TRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDV 200          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.755e-58
Identity = 109/162 (67.28%), Postives = 126/162 (77.78%), Query Frame = 2
Query:  182 ILLPSEKQXXXXXXXXXXXXTRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            I LPS               T+WAVLVAGSSGY NYRHQADVCHAYQLL+KGG+KEE+IVVFMYDDIA +E NPRPGVIIN P GE++Y+GVPKDYTG+ V   NL AV+LG++ A+KGGSGKVV+S  ND IFI+YSDHGGPGVLGMP  P +YA +  DV
Sbjct:   23 IKLPSLASKFFRPTENDDDSTKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPNLYANDLNDV 184          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.179e-57
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            TRWA+L AGSSGY NYRHQAD+CHAYQLLRKGGLK+E+I+VFMYDDIA +  NPR GVIIN P G+ +Y GVPKDYTGE VTA N YA LLGD+  + GGSGKVVNS  ND IFIFYSDHGGPGVLG P  PY+YA +  +V
Sbjct:   48 TRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPGVLGSPAGPYIYASDLNEV 189          
BLAST of FC868569 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.336e-55
Identity = 99/142 (69.72%), Postives = 119/142 (83.80%), Query Frame = 2
Query:  242 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPKDYTGEHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDV 667
            TRWA+L+AGS+GY NYRHQ+DVCHAYQLLRKGG KEE+I+VFMYDDIA +E NPRPGVIIN P G+++Y GVPKDYTG  V A N YA LLG++ A+ GGSGKVV+S  ND IF++Y+DHGGPGVLGMP  PY+YA +  +V
Sbjct:   55 TRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDLNEV 196          
The following BLAST results are available for this feature:
BLAST of FC868569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
VPE_RICCO7.049e-7373.14Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN5.228e-6872.41Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
LEGU_CANEN8.917e-6872.99Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE2_PHAVU1.165e-6770.11Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH2.056e-6467.63Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPEG_ARATH1.167e-5976.06Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_CITSI4.436e-5973.24Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEA_ARATH3.755e-5867.28Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE1_PHAVU3.179e-5772.54Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA1.336e-5569.72Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC31002A06EF AbioticL1 Citrus clementina cDNA clone C31002A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868569 ID=FC868569; Name=FC868569; organism=Citrus clementina; type=EST; length=668bp
ACGCTCCCTCTTTTTGTGCTAGTCTCTTGATTGCTTCTTCATCACTAATT
TTCTCAATTTTTTCCACGCACTCTCTATGGCCACTGCCCATCATCGCTCT
GTATTCTTTTTGCTAGTACTAGTACTGGTTCTTTTTACAGGAGGAGTTCA
AGCTGCACGGTTCAACCGAAGGGACTCAGCAATCCTGTTGCCTTCTGAGA
AGCAAGAACCGCCGGCGGAGGAAGGTGGTGAGCCTGTTGGCACTAGATGG
GCGGTTCTTGTGGCTGGATCATCTGGCTATGCAAATTACAGGCATCAGGC
CGATGTGTGCCATGCATATCAGTTGCTGAGGAAAGGTGGGTTGAAAGAAG
AGCACATAGTGGTGTTCATGTACGACGACATAGCCATGCATGAGCTTAAT
CCCAGGCCTGGTGTGATCATCAACCATCCACAAGGTGAAAATCTTTATGA
CGGTGTGCCGAAGGATTATACTGGCGAGCATGTGACTGCTCAGAATCTGT
ATGCCGTACTTCTTGGTGACAGGAAAGCTGTAAAAGGTGGAAGTGGCAAG
GTCGTGAATAGCAAGGCCAATGACAGGATCTTTATATTCTACTCTGATCA
TGGAGGCCCTGGAGTTCTTGGGATGCCAAATATGCCTTATGTGTATGCCA
TGGAATTCATTGATGTCT
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