FC868571

Overview
NameFC868571
Unique NameFC868571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9359 contig Ccv1_Contig9359:1..583. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868571 vs. ExPASy Swiss-Prot
Match: HBPL1_ARATH (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.254e-53
Identity = 108/143 (75.52%), Postives = 123/143 (86.01%), Query Frame = 1
Query:  157 ISAFEARVSLVFALASQTSSLSQRLLMDLATETAKYVFPKRFESQ-NLEEALMAVPDLETVKFKVLSRRGQYEIREVESYFIAETMMPGRTGFDFNGASRSFNVLAEYLFGKNTKRETMEMTTPVITRKTQSDGEEMEMTTPV 582
            +SA E+RVSLV ALASQ SS+SQRLL DLA ETAKYVFPKRF+S  NLEEA M+VPDLET+ F+VL R  +YEIR+VE YF+AET+MPG TGFD  GAS+SFNVLAEYLFGKNT +E MEMTTPV+TRK QS GE+MEMTTPV
Sbjct:   57 VSATESRVSLVLALASQASSVSQRLLADLAMETAKYVFPKRFDSSTNLEEAFMSVPDLETMNFRVLFRTDKYEIRQVEPYFVAETIMPGETGFDSYGASKSFNVLAEYLFGKNTIKEKMEMTTPVVTRKVQSVGEKMEMTTPV 199          
The following BLAST results are available for this feature:
BLAST of FC868571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HBPL1_ARATH1.254e-5375.52Heme-binding-like protein At3g10130, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionC31002A08EF AbioticL1 Citrus clementina cDNA clone C31002A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868571 ID=FC868571; Name=FC868571; organism=Citrus clementina; type=EST; length=583bp
CTCCAACAGAAATTCCAAAAGAAAATGCTTCTCTGCAAGCCTTCACTGTC
ACTGATCAGTCCCTGCACTCTCCCCAAAACCCTAACCCTAAAACCCACCA
AGAAACCATCCTTAACAATCATCAATTCTATCACCACCAATAATGAAAGA
AAACCCATATCAGCTTTTGAAGCTAGGGTCTCTCTCGTCTTCGCTCTCGC
ATCCCAAACTTCATCCCTCTCTCAGCGACTTTTAATGGACTTAGCAACTG
AAACTGCCAAATACGTGTTCCCAAAAAGGTTCGAGAGCCAGAATTTGGAG
GAAGCCCTGATGGCAGTTCCAGATCTTGAGACGGTGAAATTCAAGGTTTT
GAGTAGGAGAGGCCAATATGAGATAAGAGAAGTTGAGTCTTACTTCATTG
CAGAAACAATGATGCCTGGGAGAACTGGTTTCGATTTTAATGGTGCGTCT
CGATCTTTCAATGTGTTGGCTGAGTACCTGTTTGGTAAGAATACAAAAAG
GGAGACAATGGAAATGACCACTCCTGTTATTACACGTAAGACTCAATCTG
ATGGGGAAGAAATGGAAATGACAACACCTGTGA
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