FC868573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI8_ARATH (Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.894e-29 Identity = 62/103 (60.19%), Postives = 78/103 (75.73%), Query Frame = 1 Query: 289 DPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNARELTCGIWFDTY 597 D DD D+ FRR+Q +Y+VL EADI QEDDI+++STVLSISR ++ILLRHYNW VS+VHD WFADE+ VR +VG L+KPVV+ EL CGI F+T+ Sbjct: 33 DDAADDSDDLIFRRRQQNYSVLSEADICKLQEDDISRISTVLSISRNSSAILLRHYNWCVSRVHDEWFADEEKVRDAVGLLEKPVVDFPTDGELDCGICFETF 135
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI7_ARATH (Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana GN=ARI7 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.060e-26 Identity = 69/150 (46.00%), Postives = 87/150 (58.00%), Query Frame = 1 Query: 148 MDSEEDDFYSGEAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEEDPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNARELTCGIWFDTY 597 M+S EDDFYSG F+EED D D + R Q ++ VLRE DI+ Q D+I +VS VLSI+ V+ASILLRH++WSV +VHD WFADE+ VRK+VG L+ VV S+ ELTCGI FD+Y Sbjct: 13 MESGEDDFYSGGT----------------DDCNDSDDGEPDYGFVEEDAD--DSAMIASHRSQKNFCVLREEDIRRHQMDNIERVSVVLSITEVEASILLRHFHWSVGRVHDEWFADEERVRKTVGILESHVVPPSDDSELTCGICFDSY 144
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI5_ARATH (Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana GN=ARI5 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.926e-25 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 289 DPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNARELTCGIWFDTY 597 + D DD + R + +Y VL+E DI+ Q DD+ +VS VLSI+ V+AS LL HY+WSVSKV+D WFADE+ VR++VG L+ PVV + RE TCGI FD+Y Sbjct: 37 EADTDDAAIIASYRSKSNYVVLKEEDIRRHQNDDVGRVSAVLSITDVEASTLLLHYHWSVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSY 139
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI6_ARATH (Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana GN=ARI6 PE=5 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.402e-24 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 277 FIEEDPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNARELTCGIWFDTY 597 ++ + D DD ++ R Q +Y VL+E DI+ Q+DD+ +VS VLSI+ V AS+LL HY+WSVSKV+D WFADED VR++VG L+ P + RE TCGI F++Y Sbjct: 37 YVFGEADTDDAAIIAYHRSQINYVVLKEEDIRRHQKDDVGRVSVVLSITDVQASLLLLHYHWSVSKVNDEWFADEDRVRRTVGILEGPA---PDGREFTCGICFESY 140
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI11_ARATH (Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana GN=ARI11 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.483e-20 Identity = 47/102 (46.08%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 301 DDFD--NASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNAR-ELTCGIWFDTY 597 DD++ + + R + SY V++E DI Q DDI +VSTVLS+S+V++ +LL HY+W VSK+ D WF DE+ +RK+VG L +PVV+++ ++ CGI F++Y Sbjct: 45 DDYNPVDDTISRSEKSYVVVKEEDILKLQRDDIEQVSTVLSVSQVESIVLLLHYHWCVSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESY 146
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI9_ARATH (Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana GN=ARI9 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.797e-19 Identity = 46/111 (41.44%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 295 DHDDFDNA--SFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNARE--------LTCGIWFDTY 597 + DD+++ + + SY +L+E DI Q DDI +VS++LS+S+V+ +LL HYNW VSKV D WF DE+ +RK+VG L +PVV+ + + + CGI F++Y Sbjct: 25 ESDDYNDVVDTIIPSEKSYVILKEEDILKLQRDDIERVSSILSLSQVEVIVLLLHYNWCVSKVEDEWFTDEERIRKAVGLLKEPVVDFNGGEKDKKCRKVNIQCGICFESY 135
BLAST of FC868573 vs. ExPASy Swiss-Prot
Match: ARI10_ARATH (Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana GN=ARI10 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.138e-19 Identity = 41/89 (46.07%), Postives = 65/89 (73.03%), Query Frame = 1 Query: 334 QHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVELSNAR-ELTCGIWFDTY 597 + SY +++E +I Q DDI +VST+L +S+V+A +LL HY+W VSK+ D WF DE+ +RK+VG L +PVV+++ ++ CGI F++Y Sbjct: 40 EKSYVIIKEEEILKLQRDDIERVSTILFLSQVEAIVLLLHYHWCVSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESY 128 The following BLAST results are available for this feature:
BLAST of FC868573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868573 ID=FC868573; Name=FC868573; organism=Citrus clementina; type=EST; length=598bpback to top |