FC868586

Overview
NameFC868586
Unique NameFC868586
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9434 contig Ccv1_Contig9434:3..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868586 vs. ExPASy Swiss-Prot
Match: ABA2_PRUAR (Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.759e-69
Identity = 137/220 (62.27%), Postives = 169/220 (76.82%), Query Frame = 1
Query:   46 MVSSMFYNSVNLSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGT-SGQSKNPTQMKAAVA---ESPTNNSDSGNKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRSISRMTLQQILAKAVGDEIILNESNVIDFKD 693
            M S++FYNS+NLS AVFSRTHFP+P+ K   +EFS   H  +Y  R+ T SGQ K  T+++A VA   E P+  + +  KK                   K+KGF+V+VFEKD+SA+RGEGQYRGPIQIQSNALAALEAID+DVAEEVMR GCVTGDRINGLVDG+SG+WY+KFDTFTPA E+GLPVTR ISR+ LQQILA+AVG+EII+N+SNV++F+D
Sbjct:    1 MASTLFYNSMNLSAAVFSRTHFPIPINKDFPLEFSPCIHT-DYHLRSRTRSGQKKCLTEVRATVASPTEVPSAPASTQPKKLRILVAGGGIGGLVFALAAKKKGFDVVVFEKDLSAVRGEGQYRGPIQIQSNALAALEAIDMDVAEEVMRVGCVTGDRINGLVDGVSGTWYVKFDTFTPAVERGLPVTRVISRIALQQILARAVGEEIIINDSNVVNFED 219          
BLAST of FC868586 vs. ExPASy Swiss-Prot
Match: ABA2_SOLLC (Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.408e-60
Identity = 128/227 (56.39%), Postives = 157/227 (69.16%), Query Frame = 1
Query:   46 MVSSMFYNSVNLSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQMKAAVAESP---TNNSDSG--------NKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRSISRMTLQQILAKAVGDEIILNESNVIDFKD 693
            M S++FY SV+ ST+V SR   P+ + K    E      C + +   G   + K   ++KA +AE+P   T  +DSG         KK                   K++GF+VLVFE+D+SAIRGEGQYRGPIQIQSNALAALEAIDLDVAE++M AGC+TG RINGLVDGISG+WY KFDTFTPA E+GLPVTR ISRMTLQQILA+AVG+EII+NESNV+DF+D
Sbjct:    1 MYSTVFYTSVHPSTSVLSRKQLPLLISKDFSAELYHSLPCRSLE--NGHINKVKG-VKVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDFED 224          
BLAST of FC868586 vs. ExPASy Swiss-Prot
Match: ABA2_NICPL (Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.441e-57
Identity = 122/222 (54.95%), Postives = 153/222 (68.92%), Query Frame = 1
Query:   46 MVSSMFYNSVNLSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQM-KAAVAESP-----TNNSDSGNKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRSISRMTLQQILAKAVGDEIILNESNVIDFKD 693
            M S++FY SV+ ST+ FSR   P+ + K    E      C     R+  +GQ K    + KA +AE+P     T+      KK                   K++GF+VLVFE+D+SAIRGEGQYRGPIQIQSNALAALEAID+DVAE++M AGC+TG RINGLVDG+SG+WY KFDTFTPA E+GLPVTR ISRMTLQQ LA+AVG++II+NESNV++F+D
Sbjct:    1 MYSTVFYTSVHPSTSAFSRKQLPLLISKDFPTELYHSLPCS----RSLENGQIKKVKGVVKATIAEAPATIPPTDLKKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDMDVAEDIMNAGCITGQRINGLVDGVSGNWYCKFDTFTPAVERGLPVTRVISRMTLQQNLARAVGEDIIMNESNVVNFED 218          
BLAST of FC868586 vs. ExPASy Swiss-Prot
Match: ABA2_CAPAN (Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.771e-53
Identity = 105/172 (61.05%), Postives = 129/172 (75.00%), Query Frame = 1
Query:  193 SGQSKNPTQMKAAVAESPT-----NNSDSGNKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRSISRMTLQQILAKAVGDEIILNESNVIDFKD 693
            +G  K    +KA +AE+P      +NS+   KK                   K++GF+VLVFE+D+SAIRGEGQYRGPIQIQSNALAALEAID+DVAEE+M AGC+TG RINGLVDGISG+WY KFDTFTPA E+GLPVTR ISRMTLQQILA+  G+++I+NES+V++F D
Sbjct:   45 NGHIKKVKGVKATLAEAPATPTEKSNSEVPQKKLKVLVAGGGIGGLVFALAGKKRGFDVLVFERDISAIRGEGQYRGPIQIQSNALAALEAIDMDVAEEIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARLQGEDVIMNESHVVNFAD 216          
The following BLAST results are available for this feature:
BLAST of FC868586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ABA2_PRUAR1.759e-6962.27Zeaxanthin epoxidase, chloroplastic OS=Prunus arme... [more]
ABA2_SOLLC7.408e-6056.39Zeaxanthin epoxidase, chloroplastic OS=Solanum lyc... [more]
ABA2_NICPL3.441e-5754.95Zeaxanthin epoxidase, chloroplastic OS=Nicotiana p... [more]
ABA2_CAPAN8.771e-5361.05Zeaxanthin epoxidase, chloroplastic OS=Capsicum an... [more]
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Properties
Property NameValue
Genbank descriptionC31002C05EF AbioticL1 Citrus clementina cDNA clone C31002C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868586 ID=FC868586; Name=FC868586; organism=Citrus clementina; type=EST; length=694bp
GGAGGAGGGGAGAACACTGCATACAGAAGCCGTTGGAGAAACAAGATGGT
TTCATCTATGTTCTACAATTCAGTCAATCTTTCAACAGCTGTTTTCTCAA
GAACCCACTTCCCAGTTCCTGTATACAAACATTCTTGCATTGAATTTTCA
CGTTATGATCACTGTATTAACTACAAATTCAGGACCGGAACAAGTGGGCA
AAGCAAGAACCCGACACAAATGAAAGCTGCAGTGGCAGAGTCCCCTACTA
ATAACAGTGACAGTGGAAACAAGAAATTGAGGATTTTGGTGGCTGGTGGT
GGGATTGGAGGACTTGTATTTGCTTTGGCTGCTAAAAGGAAAGGATTTGA
AGTGCTGGTGTTTGAGAAAGATATGAGTGCTATAAGAGGTGAGGGACAAT
ACAGAGGTCCAATTCAGATACAAAGCAATGCATTGGCTGCTTTGGAAGCT
ATTGATTTGGATGTTGCTGAGGAAGTTATGAGAGCTGGATGTGTTACCGG
TGATAGAATTAATGGTTTGGTTGATGGGATTTCTGGTTCTTGGTACATCA
AGTTTGATACTTTCACTCCTGCAGCAGAAAAGGGACTGCCAGTCACAAGA
AGTATTAGCCGAATGACTTTGCAACAAATACTAGCTAAAGCGGTTGGGGA
TGAAATCATTTTGAATGAAAGTAATGTTATTGATTTTAAGGATC
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