FC868604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34 Identity = 77/169 (45.56%), Postives = 110/169 (65.09%), Query Frame = 3 Query: 207 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFED--FKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 LNRP LNALN M+ ++ + WEE+P+ V++KGAG +AFC+GGD+ A+ + GK D ++FF Y GT KP+VA++DGITMG G G+S+ G +RV ++KT+F+ PET +G PD G ++L L G LG YLALTG +L G ++ G+ATH+ Sbjct: 50 LNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAV---TDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLTGKLGLYLALTGFRLKGSDVQKAGIATHF 215
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34 Identity = 75/182 (41.21%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 168 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDF--KNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 VL++ + + LNRP LNAL+ M+ ++ ++WE++P+ +++KG G +AFC+GGDV A+ + GK D +++F Y+ GT KP+VA++DGITMG G G+S+ G +RV T+KTVF+ PET +G PD G ++L L G +G LALTG +L G +++ G+ATH+ Sbjct: 37 VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAI---ADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHF 215
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 76/169 (44.97%), Postives = 108/169 (63.91%), Query Frame = 3 Query: 207 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFED--FKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 LNRP LNALN M+ + WEE+P+ V++KG G +AFC+GGD+ A+ + GK D ++FF Y GT+ KP+VA++DGITMG G G+S+ G +RV ++ T+F+ PET +G PD G ++L LPG LG YLALTG +L G ++ G+ATH+ Sbjct: 50 LNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAV---TDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLGLYLALTGFRLKGSDVQKAGIATHF 215
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33 Identity = 79/218 (36.24%), Postives = 124/218 (56.88%), Query Frame = 3 Query: 54 KSLLRIKHS-FKQVAFVSHQQRSFSALPDYSSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 +SLL+ S F + S R+F P + S D VL E + +R LNRP LNA+N M+ + S EE+ +++KG GR+F SGGD+ A + +GK + ++ F Y+ + T+ KP VA+++GITMG G+G+++ +R+ + T+F+ PET +G+ D ASF+ S LPGY G YL LT + + G + + G+ATH+ Sbjct: 20 QSLLKTSVSNFLSLNASSTMSRAFIRNPKFYSTSS-NDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGKLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLPGYFGTYLGLTSQIVKGYDCLRTGIATHF 236
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33 Identity = 75/185 (40.54%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 165 QVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFV----KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 +VL+E R LNRP LNAL+ +M+ ++ ++WE++PD +++KGAG +AFC+GGD+ AL +E K + +N + L++ Y+ + KP+VA++DGITMG G G+S+ G +RV T++++F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ Sbjct: 36 EVLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKAL----SEAK-KARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHF 215
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33 Identity = 73/181 (40.33%), Postives = 114/181 (62.98%), Query Frame = 3 Query: 165 QVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 +VL+E R + LNRP LNAL+ +M+ ++ + WE +PD +++KGAG +AFC+GGD+ AL + G+ ++ F Y + KP+VA++DGITMG G G+S+ G +RV T++++F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ Sbjct: 36 EVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLS-QDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHF 215
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.641e-33 Identity = 76/211 (36.02%), Postives = 123/211 (58.29%), Query Frame = 3 Query: 75 HSFKQVAFVSHQQRSFSALPDYSSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 ++FK+ + H R S + ++VL+E + + LNRP LNAL +M+ ++ + WE++P+ +++KGAG +AFC+GGD+ + + + K + FF Y G+ KP+VA++ GITMG G G+S+ G +RV T+K +F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ Sbjct: 14 NAFKRTNTILHHLRM-------SKHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEA-EKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHF 216
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.641e-33 Identity = 74/181 (40.88%), Postives = 112/181 (61.88%), Query Frame = 3 Query: 165 QVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 +VL E K+ LNRP LNAL +M+ + + W+++ + V++KGAG +AFC+GGD+ A+ + G + FF Y GT+ KP+VA+++GITMG G G+S+ G +RV T+KT+F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ Sbjct: 33 EVLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLS-QVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHF 212
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 70/185 (37.84%), Postives = 112/185 (60.54%), Query Frame = 3 Query: 165 QVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFV----KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 +VL+E + + LNRP LN L M+ ++ + WE++P +++KGAG +AFC+GGD+ AL + N + + L++ Y+ + KP++A++ GITMG G G+S+ G +RV T+K+VF+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ Sbjct: 37 EVLLERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTNQ-----KMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHF 216
BLAST of FC868604 vs. ExPASy Swiss-Prot
Match: HIBCH_DICDI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium discoideum GN=hibch PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31 Identity = 83/189 (43.92%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 162 DQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPD-IGFVLMKGAG-RAFCSGGDVIALYQL--LNE---GKFEDFKN-FFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 704 ++VL E + K +LNRP LNALN +MV L Y + D G ++MKGAG +AFC+GGD+ A+Y LNE K D + FF Y L GT V+I +G MG G G+S+ G +RV T+ TVF+ PET +GF D G S++L LP G YLALTG KL G + G+ATH+ Sbjct: 23 EEVLFEKKGKCLKVLLNRPKALNALNPNMVKILTPKYLEMKTKKDGEGVIVMKGAGEKAFCAGGDIRAIYDYKQLNEEQKSKTNDIGDLFFREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPNNYGMYLALTGSKLKGNNVYLAGVATHF 211 The following BLAST results are available for this feature:
BLAST of FC868604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868604 ID=FC868604; Name=FC868604; organism=Citrus clementina; type=EST; length=706bpback to top |