FC868608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868608 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53 Identity = 115/202 (56.93%), Postives = 148/202 (73.27%), Query Frame = 1 Query: 151 SSISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKVTNLLAGAG-SSNIVEKQRGTIQDCKELHQITLSALQKSLPKIR-AAHDAKTLSDARAYLSAALTNKNTCLESLNSASGYLKQPLVNSIISTYRYVSNSLSALPKPATTE-----GNKHRRRLMG-FPEWLSRKDRRILQ-SSDDDNEYDLSQ 729 +S ++FCK+TP+PDACF SLKL FLLQTLQ A+SEAGK+T+LL+GAG S+N+VE QRG++QDCK+LH IT S L++S+ KI+ +D++ L+DARAYLSAALTNK TCLE L SASG LK LV S +TY+++SNSLSALPK T GN RRL+G FP+W+ +KD R L+ SSD +EYD S+ Sbjct: 35 TSATSFCKNTPYPDACFTSLKLSISINISPNILSFLLQTLQTALSEAGKLTDLLSGAGVSNNLVEGQRGSLQDCKDLHHITSSFLKRSISKIQDGVNDSRKLADARAYLSAALTNKITCLEGLESASGPLKPKLVTSFTTTYKHISNSLSALPKQRRTTNPKTGGNTKNRRLLGLFPDWVYKKDHRFLEDSSDGYDEYDPSE 236
BLAST of FC868608 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12 Identity = 63/205 (30.73%), Postives = 103/205 (50.24%), Query Frame = 1 Query: 151 SSISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKV-TNLLAGAGSSNIVEKQRGTIQDCKELHQITLSALQKSLPKI-----RAAHDAKTLSDARAYLSAALTNKNTCLES---LNS--ASGYLKQPLVNSIISTYRYVSNSLSALPKP----ATTEGNKHRRRLMGFPEWLSRKDRRILQSSDDDNEYD 720 +S+ C +T +P +CF S+ F L +L++AI E + L A A ++K I C + L L S+ + R A A ++S+ +LSAALT+++TCL++ LNS A G L Q + ++ ++ + SNSL+ + K + E H RRL+GFPEWL +RR+L+ ++D+ D Sbjct: 75 ASLKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKL-SLRVAIDELSSFPSKLRANAEQDARLQK---AIDVCSSVFGDALDRLNDSISALGTVAGRIASSA-SVSNVETWLSAALTDQDTCLDAVGELNSTAARGAL-QEIETAMRNSTEFASNSLAIVTKILGLLSRFETPIHHRRLLGFPEWLGAAERRLLEEKNNDSTPD 273
BLAST of FC868608 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 160 SNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKVTNLLAGAGSSNIVEKQRGTIQDCKELHQITLSALQKSL----PKIRAAHDAKTLSDARAYLSAALTNKNTCLESLN--SASGYLKQPLVNSIISTYRYVSNSLSALPKPATTEGNKHRRRL--MGFPEWLSRKDRRILQS 696 +++C TP+PD C K F + ++ A+ A L +G + K++ + DC +L+ T+ L ++L PK AA T DA+ +LS ALTN TC + + + ++ + N+ IS +SN L A+ T GNK GFP WLSRKD+R+L++ Sbjct: 35 TDWCDKTPYPDPCKCYFKNHNGFQQPTQLSEFRVMLVEAAMDRAISARAELTNSGKNCTDSKKQAVLADCIDLYGDTIMQLNRTLHGVSPKAGAAKSC-TDFDAQTWLSTALTNTETCRRGSSDLNVTDFITPIVSNTKIS--HLISNCL-AVNGALLTAGNKGNTTANQKGFPTWLSRKDKRLLRA 217 The following BLAST results are available for this feature:
BLAST of FC868608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868608 ID=FC868608; Name=FC868608; organism=Citrus clementina; type=EST; length=732bpback to top |