FC868617

Overview
NameFC868617
Unique NameFC868617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 7.424e-49
Identity = 103/211 (48.82%), Postives = 149/211 (70.62%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERETKQEFNL-LCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E QN IYY+  +S K+ +++PF+E L +K++EV+Y+ +PIDE A+Q L+ ++ KK V I+KE L+L + EDE K+ E  +  N  L   +K  LGDKV KV +S RL++SPCVLV+ ++GWSANMER+MKAQAL D+S   +M  ++ LE+NPDHPIV+DL  A K A  S   K  V LLY+TAL++SGF+ D P+   ++I+ M+ + L
Sbjct:  454 EGQNEIYYITGESKKAVENSPFIEGLKKKNLEVIYMCDPIDEYAVQQLKEYDGKKLVSITKEGLKLDETEDEKKKAEQDKAANEELLKQVKDVLGDKVEKVVLSTRLANSPCVLVTSEYGWSANMERIMKAQALRDSSMSSYMSSKKTLELNPDHPIVRDL--AKKAAEKSKTFKDFVYLLYETALLTSGFSLDEPSSFASRIHRMIKLGL 662          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 102/209 (48.80%), Postives = 133/209 (63.64%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  +YY+  +S +S  S+PFLE L  +D EVLY+ +PIDE A+Q ++ F  KK    +KE LEL + EDE K  E  K+E   LC  IK+ L DKV KV    R + SPC LV+ +FGWSANMER+MKAQAL D+S   +M  ++I+EINP H I+K+L A   N       K  V LLYDTAL++SGF  D P   GN+IY M+ + L
Sbjct:  484 QKFVYYITGESKQSVASSPFLETLKARDYEVLYMTDPIDEYAVQQIKEFEGKKLKCCTKEGLELDEGEDEKKSFEALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKARAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGL 692          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.320e-47
Identity = 100/209 (47.85%), Postives = 132/209 (63.16%), Query Frame = 3
Query:    9 QNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            Q  +YY+  +S +S  S+PFLE L  +D EVLY+ +PIDE A+Q ++ F  KK    +KE L+L + EDE K  E  K+E   LC  IK+ L DKV KV    R + SPC LV+ +FGWSANMER+MKAQAL D+S   +M  ++I+EINP H I+K+L     N       K  V LLYDTAL++SGF  D P   GN+IY M+ + L
Sbjct:  483 QKYVYYITGESKQSVASSPFLETLRARDYEVLYMTDPIDEYAVQQIKEFEGKKLKCCTKEGLDLDEGEDEKKSFEALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDSPCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKTRAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGL 691          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47
Identity = 95/211 (45.02%), Postives = 143/211 (67.77%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E QN IYY+  +S K+ +++PFLEKL +K  EVLY+++ IDE A+  L+ F  KK V  +KE L+L + ++ K+R  E K++F  LC  IK+ LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+++L        +    K  V LL++TAL++SGF+ D P   G++I+ M+ + L
Sbjct:  459 EGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGL 669          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47
Identity = 95/211 (45.02%), Postives = 143/211 (67.77%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E QN IYY+  +S K+ +++PFLEKL +K  EVLY+++ IDE A+  L+ F  KK V  +KE L+L + ++ K+R  E K++F  LC  IK+ LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+++L        +    K  V LL++TAL++SGF+ D P   G++I+ M+ + L
Sbjct:  459 EGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGL 669          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.448e-46
Identity = 98/211 (46.45%), Postives = 143/211 (67.77%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGD-EDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMAL 629
            E QN I+Y+  +S K+ +++PFLEKL +K IEVLY+++ IDE AI  L+ F  KK V  +KE L+L + EDE K++E  K++F  LC  IK  LGDKV KV VS R+  SPC LV+G++GW+ANMER+MKAQAL D+S   +M  ++ +EINP++ I+ +L        +    K  V LL++TAL++SGF+ D P   G++I+ M+ + L
Sbjct:  457 EGQNDIFYITGESKKAVENSPFLEKLKKKGIEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGL 667          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.448e-46
Identity = 102/227 (44.93%), Postives = 142/227 (62.56%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELG-DEDEVKE-RETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVE 677
            E Q +IYY+  +S      + F+E++ ++  EVLY+ EPIDE  +Q L+ F+ K  V ++KE LEL  DEDE K+  E K +F  LC  +K+ L  KV KV VS RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPI++ L    +   +    K  V LL++TAL+SSGF+ D P    N+IY M+ + LG      D DE   VE
Sbjct:  477 ENQKSIYYITGESKDQVAHSAFVERVCKRGFEVLYMTEPIDEYCVQQLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCKLMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVILLFETALLSSGFSLDDPQTHSNRIYRMIKLGLG-----IDEDEDVPVE 698          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46
Identity = 92/212 (43.40%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46
Identity = 92/212 (43.40%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
BLAST of FC868617 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46
Identity = 92/212 (43.40%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKER--ETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 632
            E Q +IYY+  +S +   ++ F+E++ ++  EV+Y+ EPIDE  +Q L+ F+ K  V ++KE LEL +++E K++  E+K +F  LC  +K+ L  KV KV +S RL SSPC +V+  +GW+ANMER+MKAQAL D S++ +M  ++ LEINPDHPIV+ L    +   +    K  V LL++TAL+SSGF+ + P    N+IY M+ + LG
Sbjct:  478 ETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689          
The following BLAST results are available for this feature:
BLAST of FC868617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HSC90_DICDI7.424e-4948.82Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_THEAN6.285e-4848.80Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_THEPA5.320e-4747.85Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP81_ORYSJ9.075e-4745.02Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI9.075e-4745.02Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP82_ARATH3.448e-4646.45Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HS90B_DANRE3.448e-4644.93Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HS90B_RAT4.504e-4643.40Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MACFA4.504e-4643.40Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN4.504e-4643.40Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31002F12EF AbioticL1 Citrus clementina cDNA clone C31002F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868617 ID=FC868617; Name=FC868617; organism=Citrus clementina; type=EST; length=683bp
GTGAGAAGCAAAATGCTATCTATTACTTGGCGACAGACAGCTTGAAAAGT
GCAAAGAGTGCTCCGTTTTTAGAGAAGTTAGTTCAAAAAGATATTGAGGT
TCTTTATTTAATTGAGCCCATTGATGAAGTTGCCATCCAGAACCTGCAGA
CTTTCAATGAAAAGAAATTTGTTGACATCAGCAAGGAAGATCTAGAACTT
GGTGATGAGGATGAGGTAAAAGAAAGGGAAACTAAACAAGAATTTAATCT
TCTGTGTGATTGGATAAAGCAACAACTTGGTGACAAGGTGGCAAAGGTCC
AAGTTTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAG
TTTGGATGGTCTGCTAATATGGAAAGGTTAATGAAGGCACAAGCTCTGGG
TGATACTTCAAGTTTGGAGTTTATGAGGGGAAGGAGAATATTGGAGATTA
ATCCAGATCATCCCATTGTTAAAGACTTGAATGCTGCTTGCAAGAATGCC
CCTGATAGCACTGATGCTAAGAGGGCTGTTGACCTGTTGTATGACACAGC
ATTGATCTCCAGTGGATTCACTCCTGACAGCCCAGCTGACTTGGGTAACA
AGATTTATGAGATGATGGCAATGGCTCTTGGAGGGAGATGGGGTAGATCA
GATGGGGACGAGGCAGAGTCAGTGGAAGGAATG
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