FC868622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868622 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.439e-56 Identity = 110/160 (68.75%), Postives = 124/160 (77.50%), Query Frame = 3 Query: 102 TKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPXXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKASEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGK 581 T ++P EMKAW+Y +YGGVDVLK + + VP++KEDQVLIKVVAAALNPVD KRRQGKFKATDSPLP K+ KEGDEVY +++EKA EGPKQFGSLAEYTAVEE+LLA KPKN+DF QAAGLPLAIETA EGL RT FSAGK Sbjct: 69 TADASIPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGK 228
BLAST of FC868622 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.102e-11 Identity = 47/162 (29.01%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 129 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQG---------------KFKATDSPLPXXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKASEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTG 566 M AW+ +YG +VL+F + + +P + ++V+IKV AA++NP+D R G K K + PL + FK GDEV+ A+ P + G+L+E+ V ++ KP++L QAA LP TA+ + + G Sbjct: 43 MPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDV--RYFKPGDEVW------AAVPPWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVG 196
BLAST of FC868622 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11 Identity = 48/162 (29.63%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 129 MKAWLYGEYGGVDVLKFDEKVTVPQVK-EDQVLIKVVAAALNPVDGKRRQG---------------KFKATDSPLPXXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKASEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTG 566 M AW+ +YG +VL+F + + +P + ++V++KV AA++NP+D R G K K + PL K FK GDEV+ A+ P + G+L+E+ V ++ KPK+L QAA LP TA+ + + G Sbjct: 43 MPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDV--KYFKPGDEVW------AAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVG 196 The following BLAST results are available for this feature:
BLAST of FC868622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868622 ID=FC868622; Name=FC868622; organism=Citrus clementina; type=EST; length=636bpback to top |