FC868632

Overview
NameFC868632
Unique NameFC868632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2430 contig Ccv1_Contig2430:43..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC868632 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.194e-52
Identity = 102/149 (68.46%), Postives = 116/149 (77.85%), Query Frame = 3 
Query:  261 TKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLGEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYE 707
            T   ++P EMKAW+Y +YGGVDVLK +  + VP++KEDQVLIKVVAAALNPVD KRRQGKFKATDSPLPT                 K+ KEGDEVY +++EKALEGPKQFGSL EYTAVEE+LLA KPKN+DF QAAGLPLAIETA E
Sbjct:   69 TADASIPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADE 217
The following BLAST results are available for this feature:
BLAST of FC868632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QORL_ARATH1.194e-5268.46Quinone oxidoreductase-like protein At1g23740, chl... [more]
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Properties
Property NameValue
Genbank descriptionC31002H04EF AbioticL1 Citrus clementina cDNA clone C31002H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868632 ID=FC868632; Name=FC868632; organism=Citrus clementina; type=EST; length=711bp
AAGCCGTTGGTGAGAACTACAACGTACGGTTGCAACAAATGGAGACCATA
CTTACTACTACTGCTTCTAAACTCACAATCTTTCATTCTATCTCCTCCAC
CAAATTAAATTCATTTTCTCGAAAATTTTCCGTCGGTTTCTCGGGAAACA
AAAACAGGAAAAAAGTAACCACCCTTAAGCAAGGCTCATTTTCTTACCTT
CCTCTTGGAGTTCAAGCAAGTGCATCACAAGCTGCAGCATCGTCCACTGA
GGCTGAGCCCACTAAAGTGGGAACTGTTCCAAGCGAAATGAAGGCTTGGC
TGTATGGGGAATATGGGGGCGTTGATGTTTTGAAGTTCGACGAGAAAGTG
ACAGTGCCTCAAGTGAAGGAGGATCAAGTGTTGATCAAAGTTGTCGCTGC
TGCCCTTAATCCTGTTGATGGGAAGAGAAGGCAGGGCAAGTTCAAGGCCA
CTGATTCTCCTCTCCCGACTGTTCCAGGCTATGATGTTGCTGGTGTAGTG
GTAAAGGTTGGCACTCAAGTGAAGGAATTTAAGGAGGGGGATGAAGTATA
CGGGGACATAAATGAGAAAGCTTTGGAAGGGCCCAAACAGTTTGGCTCTT
TGGGGGAGTACACTGCGGTTGAAGAGAGGTTACTGGCCCCAAAACCTAAG
AATTTGGACTTTGTTCAGGCTGCTGGGCTTCCGCTCGCTATCGAGACAGC
CTATGAGGNTC
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