FC868637

Overview
NameFC868637
Unique NameFC868637
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868637_ssr120 microsatellite FC868637_ssr120:120..129. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14527 contig Ccv1_Contig14527:6..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.129e-71
Identity = 121/172 (70.35%), Postives = 145/172 (84.30%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MKIFH+PCL+DNY+YLII+E+T +AAVVDPV+ EK+I +A++              WDHAGGNEKIK++VP IKVYGGSLD VKGCT  V+NGDK ++G  +N+L+LHTPCHTKGHISYYV GKEGE+P+VFTGDTLFVAGCGKFFEG+AEQMYQSLCVTL +LP+P QVYC
Sbjct:    1 MKIFHVPCLQDNYSYLIIDESTGDAAVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHAGGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYYVNGKEGENPAVFTGDTLFVAGCGKFFEGTAEQMYQSLCVTLAALPKPTQVYC 172          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 1.642e-46
Identity = 91/180 (50.56%), Postives = 124/180 (68.89%), Query Frame = 3
Query:    6 ALSQRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            +L ++  MK+  +P L DNY YL+I+E TKEAA+VDPVE +K+++A K+              WDHAGGNEK+ +++PG+ VYGG  D V   T +V + + F +G+ +NV  L TPCHT GHI Y+VT +   E P+VFTGDTLFVAGCGKFFEG+A++MY++L   LG LP   +VYC
Sbjct:   37 SLVEQSDMKVELLPALTDNYMYLLIDEETKEAAIVDPVEPQKVVDAVKKHGVKLKTVLTTHHHWDHAGGNEKLVKLMPGLTVYGGD-DRVGALTQKVTHYNTFKVGS-LNVKCLFTPCHTSGHICYFVTKENSTEAPAVFTGDTLFVAGCGKFFEGTADEMYKALIEVLGRLPPETRVYC 214          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.044e-45
Identity = 89/173 (51.45%), Postives = 119/173 (68.79%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPS-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  +P L DNY YLII+E T+EAA+VDPV+ +K+IEAAK+              WDHAGGNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT GHI Y+V+     +PS VFTGDTLFVAGCGKF+EG+A++MY++L   LG LP   +VYC
Sbjct:   50 MKVELLPALTDNYMYLIIDEDTQEAAIVDPVQPQKVIEAAKKHHVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPPDTKVYC 220          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 5.281e-45
Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  +P L DNY YL+I+E TKEAA+VDPV+ +K++E A++              WDHAGGNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT GHI Y+VT     E P+VFTGDTLFVAGCGKF+EG+A++MY++L   LG LP   +VYC
Sbjct:   49 MKVELLPALTDNYMYLLIDEDTKEAAIVDPVQPQKVVETARKHGVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LHVKCLSTPCHTSGHICYFVTKPNSPEPPAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPADTRVYC 219          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.176e-44
Identity = 89/173 (51.45%), Postives = 116/173 (67.05%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  IP L DNY YL+I+E +KEAA+VDPV+ +K+++A K+              WDHAGGNEK+ +MV G+KVYGG    +   T +V +   F +G+ ++V  L+TPCHT GHI YYVT     E P+VFTGDTLFVAGCGKFFEG+ E+MY +L   LG LP   +VYC
Sbjct:   54 MKVELIPALTDNYMYLLIDEESKEAAIVDPVQPQKVVDAVKKHGVKLTTVLTTHHHWDHAGGNEKLVKMVSGLKVYGGD-SRIGALTQKVSHLTTFQVGS-LHVKCLYTPCHTSGHICYYVTKPNSTEPPAVFTGDTLFVAGCGKFFEGTPEEMYAALIEVLGRLPPETRVYC 224          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_CALJA (Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Callithrix jacchus GN=HAGH PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 4.471e-44
Identity = 86/173 (49.71%), Postives = 117/173 (67.63%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  +P L DNY YL+I++ TKEAA+VDPV+ +K++E AK+              WDHAGGNEK+ ++ PG+KVYGG  D + G TH+  +     +G+ +NV  L TPCHT GHI Y+VT   G + P+VFTGDTLFVAGCGKF+EG+A++M ++L   LG  P   +VYC
Sbjct:   21 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVEEAKKHGVMLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGGLTHKGTHLSTLQVGS-LNVKCLSTPCHTSGHICYFVTKPGGSQPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRFPPDTRVYC 191          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 9.960e-44
Identity = 89/177 (50.28%), Postives = 118/177 (66.67%), Query Frame = 3
Query:   15 QRIKMKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPS-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            Q+  MKI  +P L DNY YLII+E T+EAAVVDPV+ +K+IE  K+              WDHAGGNEK+ ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT GHI Y+V+     +PS VFTGDTLFVAGCGKF+EG+A++MY++L   LG LP   +V C
Sbjct:   46 QQDMMKIELLPALTDNYMYLIIDEDTQEAAVVDPVQPQKVIETVKKHRVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGD-DRIGALTHKVTHLSTLEVGS-LSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPPDTKVIC 220          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_HUMAN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 2.898e-43
Identity = 84/173 (48.55%), Postives = 118/173 (68.21%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  +P L DNY YL+I++ TKEAA+VDPV+ +K+++AA++              WDHAGGNEK+ ++  G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT GHI Y+V+   G E P+VFTGDTLFVAGCGKF+EG+A++M ++L   LG LP   +VYC
Sbjct:   49 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYC 219          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_MACFA (Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 3.785e-43
Identity = 84/173 (48.55%), Postives = 118/173 (68.21%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEG-EDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  +P L DNY YL+I++ TKEAA+VDPV+ +K+++AA++              WDHAGGNEK+ ++  G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT GHI Y+V+   G E P+VFTGDTLFVAGCGKF+EG+A++M ++L   LG LP   +VYC
Sbjct:   49 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVLDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLQSGLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYFVSRPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYC 219          
BLAST of FC868637 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 8.431e-43
Identity = 87/173 (50.29%), Postives = 114/173 (65.90%), Query Frame = 3
Query:   27 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEREKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVT-GKEGEDPSVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPNQVYC 542
            MK+  +P L DNY YL+I+E TKEAA+VDPV+ +K+++A K+              WDHAGGNEK+ ++  G++VYGG    V   T +V +     +G+ +NV  L TPCHT GHI YYVT     E P+VFTGDTLFVAGCGKFFEG+ E+MY++L   LGSL    +VYC
Sbjct:   51 MKVEVLPALTDNYMYLLIDEETKEAAIVDPVQPQKVLDAVKKHGVKLTSVLTTHHHWDHAGGNEKLVKLETGLRVYGGD-SRVGALTQKVSHLTSLKVGS-LNVKCLCTPCHTSGHICYYVTKPNSSEPPAVFTGDTLFVAGCGKFFEGTPEEMYRALIEILGSLDPETRVYC 221          
The following BLAST results are available for this feature:
BLAST of FC868637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GLO2C_ARATH1.129e-7170.35Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_DANRE1.642e-4650.56Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MOUSE4.044e-4551.45Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_BOVIN5.281e-4550.29Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_XENTR1.176e-4451.45Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CALJA4.471e-4449.71Hydroxyacylglutathione hydrolase, mitochondrial (F... [more]
GLO2_RAT9.960e-4450.28Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_HUMAN2.898e-4348.55Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MACFA3.785e-4348.55Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CHICK8.431e-4350.29Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionC31002H09EF AbioticL1 Citrus clementina cDNA clone C31002H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868637 ID=FC868637; Name=FC868637; organism=Citrus clementina; type=EST; length=542bp
TTCGTGCACTTTCCCAGAGAATAAAAATGAAAATCTTTCATATTCCTTGT
TTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAGC
TGCAGTTGTTGATCCAGTGGAGAGAGAGAAGATCATTGAGGCTGCCAAAC
AACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGAC
CATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGGT
GTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAA
ATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCAC
ACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAGA
GGGAGAAGACCCATCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGTT
GTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGC
GTAACATTGGGCTCATTACCTCAGCCAAATCAAGTTTACTGT
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