FC868642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 4.791e-66 Identity = 104/127 (81.89%), Postives = 118/127 (92.91%), Query Frame = 1 Query: 304 DREAMQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNK 684 DR+ M+VNT RKPR+LLAASGSVAAIKFGNLCHCF+EWAEVRAV TKSSLHF+D+ +LP++V YTDEDEW++WNKIGD VLHIELRRWAD++VIAPLSANTLGKIAGGLCDNLLTCI+RAWDY K Sbjct: 7 DRQDMEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTK 133 HSP 2 Score: 35.4242 bits (80), Expect = 4.791e-66 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 687 LFVAPAMNTFMWNNP 731 LFVAPAMNT MWNNP Sbjct: 135 LFVAPAMNTLMWNNP 149 HSP 3 Score: 29.6462 bits (65), Expect = 4.791e-66 Identity = 12/15 (80.00%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 734 TERHLMSIDELGISL 778 TERHL+S+DELGI+L Sbjct: 151 TERHLLSLDELGITL 165
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.416e-61 Identity = 99/123 (80.49%), Postives = 115/123 (93.50%), Query Frame = 1 Query: 316 MQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNK 684 M+V+T RKPRILLAASGSVA+IKF NLCHCFSEWAEV+AVA+KSSL+F+D+ +LP++V YTDEDEW++WNKIGD VLHIELRRWAD+M+IAPLSANTL KIAGGLCDNLLTCIVRAWDY+K Sbjct: 3 MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVTLYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSK 125 HSP 2 Score: 35.4242 bits (80), Expect = 1.416e-61 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 687 LFVAPAMNTFMWNNP 731 LFVAPAMNT MWNNP Sbjct: 127 LFVAPAMNTLMWNNP 141 HSP 3 Score: 26.9498 bits (58), Expect = 1.416e-61 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 734 TERHLMSIDELGISL 778 TERHL+ +DELGI+L Sbjct: 143 TERHLVLLDELGITL 157
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.436e-29 Identity = 61/118 (51.69%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 337 RKPRILLAASGSVAAIKFGNLCHCFSE--WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNK 684 RK R+L+ +GSVAA+K L + EV V T+ + HF +P V Y+D DEW W + D VLHI+LRRWAD+M++APL ANTLGK+A G+CDNLLTC++RAWD NK Sbjct: 16 RKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVP--VTLYSDADEWEMWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDNLLTCVIRAWDLNK 131 HSP 2 Score: 26.5646 bits (57), Expect = 1.436e-29 Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 687 LFVAPAMNTFMWNNPSQSGILCQLMSLEFL 776 L PAMNT MW +P + + QL + ++ Sbjct: 133 LLFCPAMNTAMWEHPLTAQQVAQLKAFGYV 162
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.812e-27 Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 337 RKPRILLAASGSVAAIKFGNLCHCFSE--WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNK 684 RK +L+ +GSVAA+K L + EV V T+ + HF +P V Y+D DEW W D VLHI+LRRWAD++++APL ANTLGK+A G+CDNLLTC++RAWD +K Sbjct: 16 RKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSK 131 HSP 2 Score: 25.409 bits (54), Expect = 2.812e-27 Identity = 11/30 (36.67%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 687 LFVAPAMNTFMWNNPSQSGILCQLMSLEFL 776 L PAMNT MW +P + + QL + ++ Sbjct: 133 LLFCPAMNTAMWEHPITAQQVDQLKAFGYV 162
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: TYSY_SCHPO (Probable thymidylate synthase OS=Schizosaccharomyces pombe GN=SPAC15E1.04 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.039e-22 Identity = 51/114 (44.74%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 340 KPRILLAASGSVAAIKFGNLCHCFSEW--AEVRAVATKSSLHFIDRAALPK-DVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAW 672 K IL+AA+GSVAAIK + + +V+ V T + +F+++ L V Y + D+W W+ + + HIELRRWA +++IAPLSANT+ K+A GLCDNLLT ++RAW Sbjct: 30 KYHILVAATGSVAAIKLTLIVKSLLTYKGVDVQVVLTDPARNFVEKEDLTALGVNVYNNADDWKNWDGLECPITHIELRRWAHLLLIAPLSANTMAKMANGLCDNLLTSLIRAW 143 HSP 2 Score: 28.8758 bits (63), Expect = 1.039e-22 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 687 LFVAPAMNTFMWNNP 731 + +APAMNT MW NP Sbjct: 149 ILLAPAMNTLMWTNP 163
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: COAC_DICDI (Putative phosphopantothenoylcysteine decarboxylase OS=Dictyostelium discoideum GN=ppcdc PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.973e-22 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 340 KPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFI---DRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDY 678 K ++L +GSVA IK L + + + T++SL F+ D + Y D+DEW + + S LHI+LR WA+ ++I+P SANTLGKI+ GLCDNLLT ++RAWDY Sbjct: 12 KKNLILGLTGSVATIKAKLLVEQLIQHFNLIVIPTETSLKFLSDQDFEFISSKCKIYKDKDEWENVDLLKRSALHIDLRNWANSILISPCSANTLGKISNGLCDNLLTSLIRAWDY 127 HSP 2 Score: 29.261 bits (64), Expect = 3.973e-22 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 684 ALFVAPAMNTFMWNNP 731 ++ +APAMNT MW NP Sbjct: 131 SMILAPAMNTMMWENP 146
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: VHS3_YEAST (Protein VHS3 OS=Saccharomyces cerevisiae GN=VHS3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 478 LPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 675 LP + F+TD+DEW W + D VLHIELRRWADI+V+APL+ANTL KIA GLCDNLLT ++RAW+ Sbjct: 434 LPAHIQFWTDQDEWDVWRQRTDPVLHIELRRWADILVVAPLTANTLAKIALGLCDNLLTSVIRAWN 499
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: SIS2_YEAST (Protein SIS2 OS=Saccharomyces cerevisiae GN=SIS2 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.317e-20 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 478 LPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 675 LP + +TD+DEW W + D VLHIELRRWADI+V+APL+ANTL KIA GLCDNLLT ++RAW+ Sbjct: 353 LPPHIQLWTDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWN 418
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: SIS2_CANTR (Protein SIS2 OS=Candida tropicalis GN=SIS2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 412 SEWAEVRAVATKSSLHFIDRAALP-----KDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 675 S+ ++ + TKSS +F+ L K V +TD DEW TW D VLHIELRRWADI+++ PL+ANTL KI+ G+CDNLLT ++RAW+ Sbjct: 296 SDKISIQVILTKSSENFLLPETLNVLENVKKVRVWTDIDEWTTWKTRLDPVLHIELRRWADILLVCPLTANTLAKISLGICDNLLTNVIRAWN 388
BLAST of FC868642 vs. ExPASy Swiss-Prot
Match: YKI8_YEAST (Uncharacterized protein YKL088W OS=Saccharomyces cerevisiae GN=YKL088W PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.949e-18 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 277 MAYSEPTSTDREAMQVNTGLRKP-------------RILLAASGSVAAIK----FGNLCHCFS-EWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWA--TWNKIGDS-----VLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAW 672 ++ + T ++E + TG R P IL+ A+GSVA IK L + E ++ + TK + HF+ + V + +ED W NK S +LH ELR+WADI +IAPLSANTL K+A G+C+NLLT ++R W Sbjct: 274 LSANNSTHKNKEVITAPTGPRVPFTEFFQKEDDKKFHILIGATGSVATIKVPLIIDKLFKIYGPEKISIQLIVTKPAEHFLKGLKMSTHVKIWREEDAWVFDAVNKNDTSLSLNLILHHELRKWADIFLIAPLSANTLAKLANGICNNLLTSVMRDW 430 HSP 2 Score: 27.335 bits (59), Expect = 2.949e-18 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 687 LFVAPAMNTFMWNNPSQSGILCQLM 761 + +APAMNTFM+ NP L L+ Sbjct: 436 VLIAPAMNTFMYINPMTKKHLTSLV 460 The following BLAST results are available for this feature:
BLAST of FC868642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868642 ID=FC868642; Name=FC868642; organism=Citrus clementina; type=EST; length=778bpback to top |